Query= MSMg01no262_p11.b1 MSMg01no262_p11.b1 CHROMAT_FILE:
MSMg01no262_p11.b1 PHD_FILE: MSMg01no262_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:45 2005
(574 letters)
>mm_chr14_86363360_86364333
Length = 974
Score = 967 bits (500), Expect = 0.0
Identities = 554/572 (96%), Gaps = 3/572 (0%)
Strand = Plus / Plus
Query: 4 ggaattcagaggaatcaagggacaatgttttccacagttaacaataacaatgtaccagat 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagaggaataaagggacaatgttttccacagttaacaataacaatgtaccagat 263
Query: 64 atcagtgatccagcattgggttgcatagtggtttgtttcttttttctcttttcttgaaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atcagtgatccagcattgggttgcatagtggtttgtttcttttttctcttttcttgaaca 323
Query: 124 ttcatcatcatcatcattctttaacttatttttcagtccagtctttatcccccttctggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttcatcatcatcatcattctttaacttatttttcagtccagtctttatcccccttctggt 383
Query: 184 ccgccctcctactcttcctcatcccgttcatcctccgctgtctccaagaggatgtcctct 243
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 384 ccgccctcctactcttcctcatcccgttcatccttcgctgtctccaagaggatgtcctct 443
Query: 244 cccccaaacccccaacttccaatcccaccagacctccccattcgctggggcctcaaatat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cccccaaacccccaacttccaatcccaccagacctccccattcgctggggcctcaaatat 503
Query: 304 ctccaggtttaggtgcatcttctctcactaaggtcagaccaggcaagtactctgctgtac 363
||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct: 504 ctccagggttaggtgcatcttctctcactaaggtaagaccaggca-gtcctctgctgtat 562
Query: 364 atgcgcccgcggcctcgtatcagttggtgtatgctgtctggttggtggctcagggtctga 423
||| | | |||||| |||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 563 atgtgttgggggcctcatatcagctagtgtatgctgtctggttggtggctcagggtctga 622
Query: 424 gagatctccaggg-tccaggttagttgagattgctggtcttcctatggtgtcaccctcct 482
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gagatctc-aggggtccaggttagttgagattgctggtcttcctatggtgtcaccctcct 681
Query: 483 cctcaccttatccagtatttccctaattcaaccacaggggtttccaactctgtccattgg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 cctcaccttatccagtatttccctaattcaaccacaggggtttccaactctgtccattgg 741
Query: 543 cttggtgtaagtatctgcatctgatattttca 574
|||||||||||||||||||||||||||||||
Sbjct: 742 tttggtgtaagtatctgcatctgatattttca 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_p11.g1 MSMg01no262_p11.g1 CHROMAT_FILE:
MSMg01no262_p11.g1 PHD_FILE: MSMg01no262_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:45 2005
(341 letters)
>mm_chr14_86550026_86550766
Length = 741
Score = 659 bits (341), Expect = 0.0
Identities = 341/341 (100%)
Strand = Plus / Minus
Query: 1 tgtttgggataagggatttctcagcatctggatattagcttccctctggacctaatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtttgggataagggatttctcagcatctggatattagcttccctctggacctaatttta 482
Query: 61 cctctgtactgaatattgccagctggaagtactagagggaatctcaattcctagttaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctctgtactgaatattgccagctggaagtactagagggaatctcaattcctagttaaga 422
Query: 121 gtagtaatgtatgggcaacaagcccagagctctctttcccttgtgaaatggcactcatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtagtaatgtatgggcaacaagcccagagctctctttcccttgtgaaatggcactcatgg 362
Query: 181 ggttttgccgcaggtgcccaaaaacttgaagcagctgcgcattcatgggacatttggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggttttgccgcaggtgcccaaaaacttgaagcagctgcgcattcatgggacatttggtgg 302
Query: 241 ggacacttccccttctgaagaaaccacaaatccttttttgggcatgtcttagtctatata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggacacttccccttctgaagaaaccacaaatccttttttgggcatgtcttagtctatata 242
Query: 301 gaaaattacagtcaaatccaccaaactgggtgaggtataaa 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaaattacagtcaaatccaccaaactgggtgaggtataaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
