Query= MSMg01no263_h05.b1 MSMg01no263_h05.b1 CHROMAT_FILE:
MSMg01no263_h05.b1 PHD_FILE: MSMg01no263_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:22 2005
(608 letters)
>mm_chr14_59698882_59699889
Length = 1008
Score = 1029 bits (532), Expect = 0.0
Identities = 582/616 (94%), Gaps = 30/616 (4%)
Strand = Plus / Plus
Query: 5 gaattcagtcaagactaccatgaagatcacaagaacccatcacaagaacccctagcagaa 64
|||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 218 gaattcagtcaagactaccatgaagatcacaagaaccc-------------ctagcagaa 264
Query: 65 ctgaccatagcacaaaccctgaggtggacctgggctgtgagttgacaaattggttacaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgaccatagcacaaaccctgaggtggacctgggctgtgagttgacaaattggttacaaa 324
Query: 125 agtctctgtgtggttcaagcagctgtgaccctttgtggagccaatatggactccagttgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtctctgtgtggttcaagcagctgtgaccctttgtggagccaatatggactccagttgt 384
Query: 185 cagcacagatctcaaagcggttaatacccagcagagttttgctgggtactactgctgctg 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagcacaggtctcaaagcggttaatacccagcagagttttgctgggtactactgctgctg 444
Query: 245 ctactactactactactactactactactactacta------------ttactattaatt 292
|||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 ctactactactactactactactactactactactactactaccactattactattaatt 504
Query: 293 catttttagttgacacacaataattacataaatttacagttaccatatgagattttagtg 352
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cattttt-gttgacacataataattacataaatttacagttaccatatgagattttagtg 563
Query: 353 catttttatgatgagtaagcatgtctatcacatcaaatactaattgtctgggttaggaac 412
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 564 catttttatgatgagtaagtat----atcacatcaaatactaattgtctgggttaggaac 619
Query: 413 attcaaaatctcttctcatgatattttagagtatatggtagttatggctcaccatggcta 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attcaaaatctcttctcatgatattttagagtatatggtagttatggctcaccatggcta 679
Query: 473 tctactggctatgttcctatctagctgtggttccggtgctgataactaacttctgtctcc 532
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 680 tctactggctatgttcctatctagctgtggttccggtgctgataactaacttccgtctcc 739
Query: 533 tttcgttcactcacccttctcagcctctgatagttctataaaatcaactttttaacctgc 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tttcgttcactcacccttctcagcctctgatagttctataaaatcaactttttaacctgc 799
Query: 593 tcctcatgagtgaaaa 608
||||||||||||||||
Sbjct: 800 tcctcatgagtgaaaa 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_h05.g1 MSMg01no263_h05.g1 CHROMAT_FILE:
MSMg01no263_h05.g1 PHD_FILE: MSMg01no263_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:22 2005
(288 letters)
>mm_chr14_59839155_59839842
Length = 688
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%)
Strand = Plus / Minus
Query: 1 ctaactgtcctagggacttcacatgaacacggacaccctgctgacaaggcctatgcaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 488 ctaactgtcctagggacttcacatgaacacggacaccctgctgacaaggcctatgaaatc 429
Query: 61 tgtctggacctgcaattcatccatatgcccatccactccttagacccaaccctacctcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgtctggacctgcaattcatccatatgcccatccactccttagacccaaccctacctcgt 369
Query: 121 gccccttgagcctctacttcaccttgcttctgaagctcaattctgatgcacactttgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gccccttgagcctctacttcaccttgcttctgaagctcaattctgatgcacactttgact 309
Query: 181 ctagcagccccagctatcacttctcctccagagccccagcctggcttcatttgctcccac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 308 ctagcagccccagctatcacttctcctccagagccccagcctggcttcatttcctcccac 249
Query: 241 agagactctccttgcacctctaccagcttttacctctcaggtctcctt 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 agagactctccttgcacctctaccagcttttacctctcaggtctcctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
