Query= MSMg01no266_e06.b1 MSMg01no266_e06.b1 CHROMAT_FILE:
MSMg01no266_e06.b1 PHD_FILE: MSMg01no266_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:00 2005
(275 letters)
>mm_chr14_32059504_32060178
Length = 675
Score = 516 bits (267), Expect = e-151
Identities = 270/271 (99%)
Strand = Plus / Plus
Query: 5 gaattccaggagcagagtgaggaggactcggggaaaggggctgtaaaggggaggattcca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggagcagagtgaggaggactcggggaaaggggctgtaaaggggaggattcca 264
Query: 65 tagcagagggatgaaatgcagagaaggaacaggtgagcattaggacagtgtcttaatcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagcagagggatgaaatgcagagaaggaacaggtgagcattaggacagtgtcttaatcta 324
Query: 125 agggcatccccaagggatcagtggacaggtgtcccttgtccactttgatggggagcacag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agggcatccccaagggatcagtggacaggtgtcccttgtccactttgatggggagcacag 384
Query: 185 gatggtgtagggaggcttgcctggcatactggtatgacttttatagcaggctccagacag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatggtgtagggaggcttgcctggcatactggtatgacttttatagcaggctccagacag 444
Query: 245 ggtaggaagctctgggaggacattcagttga 275
||||||||||||| |||||||||||||||||
Sbjct: 445 ggtaggaagctctcggaggacattcagttga 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no266_e06.g1 MSMg01no266_e06.g1 CHROMAT_FILE:
MSMg01no266_e06.g1 PHD_FILE: MSMg01no266_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:01 2005
(287 letters)
>mm_chr14_32224386_32225072
Length = 687
Score = 538 bits (278), Expect = e-157
Identities = 287/294 (97%), Gaps = 7/294 (2%)
Strand = Plus / Minus
Query: 1 tttcctggtgtttctggtcagatgcagcagatgtttgctgctcccttctaaaacctcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tttcctggtgtttctggtcagatgcagcagatgtttgctgctcccttctaaaacctcctg 514
Query: 61 gtgataattcctccatctt-------cctccccccaactataggatgcacgccagaagtt 113
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 513 gtgataattcctccatcttcctcccccctccccccaactataggatgcacgccagaagtt 454
Query: 114 ccgatctgtcctggtcgaggcaacggtgaaactagacgaactggcaaagaaaatcggcaa 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ccgatctgtcctggtcgaggcaacggtgaaactagacgaactggcaaagaaaatcggcaa 394
Query: 174 agccgtggaggactcgaagccctactgggaggcccggagggtggcaaggcaggtaagaca 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agccgtggaggactcgaagccctactgggaggcccggagggtggcaaggcaggtaagaca 334
Query: 234 gcctgaaggtgtctgctctgcccgtgtatctcccactgaagtttagaagcacct 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gcctgaaggtgtctgctctgcccgtgtatctcccactgaagtttagaagcacct 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
