Query= MSMg01no267_k21.b1 MSMg01no267_k21.b1 CHROMAT_FILE:
MSMg01no267_k21.b1 PHD_FILE: MSMg01no267_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:48 2005
(249 letters)
>mm_chr14_104224383_104225031
Length = 649
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%)
Strand = Plus / Minus
Query: 1 acactctcctaatatggctacttctgtttggacatcatctcaagtactgatgcgtttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acactctcctaatatggctacttctgtttggacatcatctcaagtactgatgcgtttgtg 390
Query: 61 tcttccttgttatatgtaagctctacagaagccagtagtgtgccttgtactcagaatatt 120
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 389 tcttccttgttatatgtaagctctacagaaaccagtagtgcgccttgtactcagaatatt 330
Query: 121 ctttatggtgaatattcaatgcacgttggttgaatgaactaatgactagttaatttacta 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctttatggtgaatattcaatgcccgttggttgaatgaactaatgactagttaatttacta 270
Query: 181 atccagaagctctcatacacattatagaatctacctagtcaatacaacataatataataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atccagaagctctcatacacattatagaatctacctagtcaatacaacataatataataa 210
Query: 241 tgtctttta 249
|||||||||
Sbjct: 209 tgtctttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no267_k21.g1 MSMg01no267_k21.g1 CHROMAT_FILE:
MSMg01no267_k21.g1 PHD_FILE: MSMg01no267_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:48 2005
(579 letters)
>mm_chr14_104059922_104060900
Length = 979
Score = 1046 bits (541), Expect = 0.0
Identities = 571/581 (98%), Gaps = 3/581 (0%)
Strand = Plus / Plus
Query: 1 attcatcgtccaggttgttgccacgtgatcgggagt-cccgatagcggcctctccctttc 59
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 201 attcatcgtccaggttgttgccacgtgatcgggagttcccg-tagcggcctctccctttc 259
Query: 60 tcttctgtaaggtgtccttgtctgtgtttggtgtctaatgagtctgttggaatttattca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcttctgtaaggtgtccttgtctgtgtttggtgtctaatgagtctgttggaatttattca 319
Query: 120 gataattagattggtctttgttaaagtctgggcggcacctgaggacttgagtgctttcct 179
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 320 gataattagattggtctttgttaaagtctgagcggtacctgaggacttgagtgctttcct 379
Query: 180 acctgtttctccacacaacttccttcccaccgtggaccttgcagcagcagctccagaccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acctgtttctccacacaacttccttcccaccgtggaccttgcagcagcagctccagaccc 439
Query: 240 ttctagagtcttactcgtttcccttgttgtgggctcattaaacagtgctgaaatccaaat 299
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 440 ttctagagtcttactcgtttcccttgttgtgggcttattaaacagtgctgaaatccaaac 499
Query: 300 ctgtcacccagtcgatctctgctctctaagatgctgcgaccctctaggccaggggttatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 500 ctgtcacccagtcgatctctgctctctaagatgctgcgaccctctaggccaggggttctc 559
Query: 360 agccttcctagttctgtgg-agtctttgatacagttcctcatgtggtgacccccaaccat 418
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agccttcctagttctgcgggagtctttgatacagttcctcatgtggtgacccccaaccat 619
Query: 419 cttgttgctactttgtagctgtaattttgctactgttacgagtcacaatgtcaatatctg 478
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 620 cttgttgctactttgtagctgtaattttgctactgttacgagtcacaatgtcgatatctg 679
Query: 479 ttttccagtggtcttagacaatccctgctaaggggtcgtttgactcccaccccagagggg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttttccagtggtcttagacaatccctgctaaggggtcgtttgactcccaccccagagggg 739
Query: 539 gtcaccacccacaggttgagagcccctgctgtagtccgatg 579
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtcaccacccacaggttgagagcccctgctgtagtccgatg 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
