Query= MSMg01no267_p18.b1 MSMg01no267_p18.b1 CHROMAT_FILE:
MSMg01no267_p18.b1 PHD_FILE: MSMg01no267_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:11 2005
(326 letters)
>mm_chr14_92377490_92378215
Length = 726
Score = 565 bits (292), Expect = e-165
Identities = 313/320 (97%), Gaps = 2/320 (0%)
Strand = Plus / Plus
Query: 5 gaattctctatataaatctttaacatcatataggcatcttaatttttctataagtttgga 64
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Sbjct: 205 gaattctctatataaatctttaacatcatataggcatcttaatttttctataagtttgga 264
Query: 65 ttctatttatttatcaattcacttaattaactagactgtccaacatgctctttaaaagta 124
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Sbjct: 265 ttctatttatttatcaatttaattaattaactagactgtccaacatgctctttaaaagta 324
Query: 125 atgagtcctgaaaaagaataaggcctattggtacttggatattctgatcagggcctaagg 184
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Sbjct: 325 atgagtcctgaaaaagaataaggcctattggtacttggatattctgatcagggcctaagg 384
Query: 185 caattgtcatcagagagtcattgtccagcaagtgatagatgaaaatgcagagaccttagc 244
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Sbjct: 385 caattgtcatcagagaggcattgtccagcaagtgatagatgaaaatgcagagaccttagc 444
Query: 245 caaacactgtacagatg-caggagaacattgacgaacagtgttaggaaggattctagggg 303
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Sbjct: 445 caaacactgtacaga-gtcaggagaacattgacgaacagtgggaggaaggattctagggg 503
Query: 304 ttacaggattcagtaacatc 323
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Sbjct: 504 ttacaggattcagtaacatc 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_p18.g1 MSMg01no267_p18.g1 CHROMAT_FILE:
MSMg01no267_p18.g1 PHD_FILE: MSMg01no267_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:11 2005
(104 letters)
>mm_chr14_92548845_92549348
Length = 504
Score = 199 bits (103), Expect = 3e-56
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 2 atatttaaacttatcaaatattttaatgattttatggagaaagtatgaagttaaagctag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atatttaaacttatcaaatattttaatgattttatggagaaagtatgaagttaaagctag 245
Query: 62 cagaatcactgtacttcaatatagaaaatgataagacaattct 104
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Sbjct: 244 cagaatcactgtacttcaatatagaaaatgataagacaattct 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 504
Length adjustment: 8
Effective length of query: 96
Effective length of database: 496
Effective search space: 47616
Effective search space used: 47616
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
