Query= MSMg01no271_b08.b1 MSMg01no271_b08.b1 CHROMAT_FILE:
MSMg01no271_b08.b1 PHD_FILE: MSMg01no271_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:53 2005
(672 letters)
>mm_chr14_111663243_111664314
Length = 1072
Score = 1232 bits (637), Expect = 0.0
Identities = 661/669 (98%)
Strand = Plus / Minus
Query: 4 ggaattcaaatacatcagaaaaagcactgctgcctcaaccacacaggatatgttcctggt 63
|||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 872 ggaattcagatacatcagaaaattcattgctgcctcaaccacacaggatatgttcctggt 813
Query: 64 gtataggtattattgccaaatgtgctcaagaaaaaaatttcagtacctatgtatggatat 123
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 812 gtataggtattattgccaaatgtgctcaagaaaaagatttcagtacctatgtatggatat 753
Query: 124 taaattgtacatgggtgacaaagagaagatcaggggcttaaggctgcccatggataccta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 taaattgtacatgggtgacaaagagaagatcaggggcttaaggctgcccatggataccta 693
Query: 184 gatattggaagccagcctgaaagacctgtgaccatttttcaactatcctttgaaaaagta 243
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 692 gatattggaagccagcctgaaagacctgtgaccatttgtcaactatcctttgaaaaagta 633
Query: 244 tttttacatataatagaactagttaatgacttgaaaaatactgtccataatgtgtgcaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tttttacatataatagaactagttaatgacttgaaaaatactgtccataatgtgtgcaca 573
Query: 304 gaatattgagttttaaagttagggcaataaatatgaagaacagttctaataaaaaaatga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gaatattgagttttaaagttagggcaataaatatgaagaacagttctaataaaaaaatga 513
Query: 364 ctaattctgtctctaagaaagaaaaggttgatgaaatctataattttaaatgttgagtat 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ataattctgtctctaagaaagaaaaggttgatgaaatctataattttaaatgttgagtat 453
Query: 424 accaccaaagaaattagtattaaaaaccaaccattgataaactcaaaaatattttaggct 483
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 452 accaccaaagaaattagtattaaaaaccgaccattgataaactcaaaaatattttaggct 393
Query: 484 tctttaaagcattagggcatttcttcagcattttaattatatggttcaaataaataccag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tctttaaagcattagggcatttcttcagcattttaattatatggttcaaataaataccag 333
Query: 544 aaaatcaagccagaatttaatagatatgaaatgagaagagttcatgatttatagttgctg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aaaatcaagccagaatttaatagatatgaaatgagaagagttcatgatttatagttgctg 273
Query: 604 tgagattagactaagcatatgtttgaaatggtttttgtagctcatactgggtgccaagga 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tgagattagactaagcatatgtttgaaatggtttttgtagctcatactgggtgccaagga 213
Query: 664 caaaactct 672
|||||||||
Sbjct: 212 caaaactct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_b08.g1 MSMg01no271_b08.g1 CHROMAT_FILE:
MSMg01no271_b08.g1 PHD_FILE: MSMg01no271_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:53 2005
(634 letters)
>mm_chr14_111512936_111513971
Length = 1036
Score = 1067 bits (552), Expect = 0.0
Identities = 626/674 (92%), Gaps = 40/674 (5%)
Strand = Plus / Plus
Query: 1 acttcccaatagaaaagtagaaaaagaagaacaggagagagagagaga------------ 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 acttcccaatagaaaagtagaaaaagaagaacaggagagagagagagagagagagagaga 222
Query: 49 ------------------gcgagagagagagagagagagagagagagagagagagagaga 90
| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gagagagagagagagggggagagagagagagagagagagagagagagagagagagagaga 282
Query: 91 gagaga--ggacaag-ttttttttaaaaaaaa------aaagaacaaatacattccactg 141
|||||| ||||||| |||||||||||||||| ||| ||||||||||||||||||
Sbjct: 283 gagagaggggacaagtttttttttaaaaaaaaaaaaacaaataacaaatacattccactg 342
Query: 142 tcaggtgctatgtctttctactaaaaacagtacaaaaccaccacaaacagtagctacttc 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcaggtgctatgtctttctactaaaaacagtacaaaaccaccacaaacagtagctacttc 402
Query: 202 atccatgtataatctaaaactgacaagactcctttaaacttctcagtaccctaacctgtg 261
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 403 atccatgtataacctaaaactgacaagactcctttaaacttctctgtaccctaacctgtg 462
Query: 262 ggctgtcttcagggtgtattcatagcttatagcactcagattgcctagcaattaagtgac 321
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 463 ggctgtcttcagggtgtattcatagcttatagcactcagattgcctagtaattaagtgac 522
Query: 322 atttaactgttgtttcactgaaattactgctgggaagtacccagttaacatttacaatgg 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 atttaactgttgtttcactgaaattactgctgggaagtacccagttaacatttacaatgg 582
Query: 382 attgggcccaaccacaaagagatattccaccagttctcctttacagatatccacaaagta 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 attgggcccaaccacaaagagatattccaccagttctcctttacagatatccacaaagta 642
Query: 442 aatatgattaattattctcatacttagagaagaatctcaaatatagcaatcatcagctaa 501
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 643 aatatgattaattattctcatacatagagaagaatctcaaatatagaaatcatcagctaa 702
Query: 502 acaaacaaaaatcctaagtaaacagaaatatgaaataaaatcagaaacaagataaaaa-t 560
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 703 acaaacaaaaatcctaagtaaacagagatatgaaataaaatcagaaacaagataaaaaat 762
Query: 561 gtaaaataaattaaatgtaatctaatctatagtttcaaaattctggtaaaacgttgctca 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gtaaaataaattaaatgtaatctaatctatagtttcaaaattctggtaaaacgttgctca 822
Query: 621 gactgtaagacact 634
||||||||||||||
Sbjct: 823 gactgtaagacact 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 99
Number of extensions: 39
Number of successful extensions: 39
Number of sequences better than 10.0: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1036
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1026
Effective search space: 640224
Effective search space used: 640224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
