MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-271H21
Chromosome	14 (Build37)
Map Location	31,977,122 - 31,977,330
singlet/doublet	singlet
Overlap gene	Stab1
Upstream gene	Cacna1d, LOC665399, Dcp1a, Tkt, Prkcd, EG665466, Rft1, Sfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2
Downstream gene	Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd, Ankrd28, Galntl2, Dph3, Oxnad1, Msmb, Ncoa4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cacna1d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12289 MGI:88293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC665399 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665399
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Dcp1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75901 MGI:1923151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tkt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21881 MGI:105992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkcd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18753 MGI:97598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665466 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665466 MGI:3646878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Rft1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328370 MGI:3607791
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfmbt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54650 MGI:1859609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem110 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69179 MGI:1921500
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mustn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66175 MGI:1913425
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itih4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16427 MGI:109536
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itih3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16426 MGI:96620
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itih1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16424 MGI:96618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nek4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23955 MGI:1344404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spcs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69019 MGI:1916269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glt8d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76485 MGI:1923735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30877 MGI:1353651
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Pbrm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66923 MGI:1923998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432834 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432834 MGI:3643518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 558 ESTs, 13 Proteins

name	Nt5dc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70021 MGI:1917271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stab1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192187 MGI:2178742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nisch (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64652 MGI:1928323
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnnc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21924 MGI:98779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sema3g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218877 MGI:3041242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phf7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71838 MGI:1919088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104416 MGI:1206586
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnahc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110084 MGI:107721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 12 Proteins

name	Capn7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12339 MGI:1338030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3bp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24056 MGI:1344391
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mettl6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67011 MGI:1914261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eaf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74427 MGI:1921677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Colq (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382864 MGI:1338761
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hacl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56794 MGI:1929657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Btd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26363 MGI:1347001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankrd28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105522 MGI:2145661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Galntl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78754 MGI:1926004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dph3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105638 MGI:1922658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Oxnad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218885 MGI:1916953
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Msmb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17695 MGI:97166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ncoa4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27057 MGI:1350932
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cacna1d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288899 GeneID:12289 MGI:88293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, L type, alpha 1D subunit transcript_id : NM_028981.2

name	Cacna1d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288874 GeneID:12289 MGI:88293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium channel, voltage-dependent, L type, alpha 1D subunit transcript_id : NM_001083616.1

name	Dcp1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778957 GeneID:75901 MGI:1923151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : decapping enzyme transcript_id : NM_133761.3

name	Tkt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385382 GeneID:21881 MGI:105992
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transketolase transcript_id : NM_009388.3

name	Prkcd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130235 GeneID:18753 MGI:97598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, delta transcript_id : NM_011103.2

name	EG665466 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94396854 GeneID:665466 MGI:3646878
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG665466 transcript_id : XM_977131.1

name	Rft1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87299620 GeneID:328370 MGI:3607791
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RFT1 homolog (S. cerevisiae) transcript_id : NM_177815.3

name	Sfmbt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9507088 GeneID:54650 MGI:1859609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Scm-like with four mbt domains 1 transcript_id : NM_019460.1

name	Tmem110 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802607 GeneID:69179 MGI:1921500
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 110 transcript_id : NM_028839.3

name	Mustn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802278 GeneID:66175 MGI:1913425
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : musculoskeletal, embryonic nuclear protein 1 transcript_id : NM_181390.2

name	Itih4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382967 GeneID:16427 MGI:109536
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inter alpha-trypsin inhibitor, heavy chain 4 transcript_id : NM_018746.2

name	Itih3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680495 GeneID:16426 MGI:96620
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inter-alpha trypsin inhibitor, heavy chain 3 transcript_id : NM_008407.1

name	Itih1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385310 GeneID:16424 MGI:96618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inter-alpha trypsin inhibitor, heavy chain 1 transcript_id : NM_008406.3

name	Nek4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893154 GeneID:23955 MGI:1344404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NIMA (never in mitosis gene a)-related expressed kinase 4 transcript_id : NM_011849.2

name	Spcs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386308 GeneID:69019 MGI:1916269
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal peptidase complex subunit 1 homolog (S. cerevisiae) transcript_id : NM_026911.2

name	Glt8d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313215 GeneID:76485 MGI:1923735
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycosyltransferase 8 domain containing 1 transcript_id : NM_029626.1

name	Gnl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363446 GeneID:30877 MGI:1353651
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein-like 3 (nucleolar) transcript_id : NM_178846.2

name	Gnl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802620 GeneID:30877 MGI:1353651
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein-like 3 (nucleolar) transcript_id : NM_153547.3

name	Pbrm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486950 GeneID:66923 MGI:1923998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polybromo 1 transcript_id : NM_001081251.1

name	EG432834 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265389 GeneID:432834 MGI:3643518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 558 ESTs, 13 Proteins product : predicted gene, EG432834 transcript_id : XM_484358.5

name	Nt5dc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625754 GeneID:70021 MGI:1917271
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5'-nucleotidase domain containing 2 transcript_id : NM_027289.1

name	Stab1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20149761 GeneID:192187 MGI:2178742
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stabilin 1 transcript_id : NM_138672.1

name	Nisch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114158671 GeneID:64652 MGI:1928323
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nischarin transcript_id : NM_022656.2

name	Tnnc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892226 GeneID:21924 MGI:98779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : troponin C, cardiac/slow skeletal transcript_id : NM_009393.2

name	Sema3g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84794604 GeneID:218877 MGI:3041242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G transcript_id : NM_001025379.1

name	Phf7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313645 GeneID:71838 MGI:1919088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PHD finger protein 7 transcript_id : NM_027949.1

name	Bap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:92110038 GeneID:104416 MGI:1206586
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Brca1 associated protein 1 transcript_id : NM_027088.2

name	Dnahc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94396881 GeneID:110084 MGI:107721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 12 Proteins product : dynein, axonemal, heavy chain 1 transcript_id : XM_977593.1

name	Capn7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061447 GeneID:12339 MGI:1338030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calpain 7 transcript_id : NM_009796.2

name	Sh3bp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109150404 GeneID:24056 MGI:1344391
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-domain binding protein 5 (BTK-associated) transcript_id : NM_011894.2

name	Mettl6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129886 GeneID:67011 MGI:1914261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methyltransferase like 6 transcript_id : NM_025907.3

name	Eaf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362843 GeneID:74427 MGI:1921677
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELL associated factor 1 transcript_id : NM_028932.3

name	Colq (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114703722 GeneID:382864 MGI:1338761
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase transcript_id : NM_009937.1

name	Hacl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560354 GeneID:56794 MGI:1929657
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 2-hydroxyacyl-CoA lyase 1 transcript_id : NM_019975.2

name	Btd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349017 GeneID:26363 MGI:1347001
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : biotinidase transcript_id : NM_025295.2

name	Ankrd28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131111 GeneID:105522 MGI:2145661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 28 transcript_id : NM_001024604.2

name	Galntl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803181 GeneID:78754 MGI:1926004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2 transcript_id : NM_030166.2

name	Dph3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145562 GeneID:105638 MGI:1922658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DPH3 homolog (KTI11, S. cerevisiae) transcript_id : NM_001047433.1

name	Dph3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145549 GeneID:105638 MGI:1922658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DPH3 homolog (KTI11, S. cerevisiae) transcript_id : NM_172254.3

name	Oxnad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703913 GeneID:218885 MGI:1916953
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxidoreductase NAD-binding domain containing 1 transcript_id : NM_145460.1

name	Msmb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130511 GeneID:17695 MGI:97166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta-microseminoprotein transcript_id : NM_020597.2

name	Ncoa4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77404401 GeneID:27057 MGI:1350932
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 4 transcript_id : NM_001033988.1

name	Cacna1d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288900 GeneID:12289 MGI:88293
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005891 - voltage-gated calcium channel complex [Evidence TAS]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005245 - voltage-gated calcium channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; alpha 1 E; Cav1.3alpha1 product : calcium channel, voltage-dependent, L type, alpha 1D subunit isoform 1 protein_id : NP_083257.2

name	Cacna1d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288875 GeneID:12289 MGI:88293
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005891 - voltage-gated calcium channel complex [Evidence TAS]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005245 - voltage-gated calcium channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; alpha 1 E; Cav1.3alpha1 product : calcium channel, voltage-dependent, L type, alpha 1D subunit isoform 2 protein_id : NP_001077085.1

name	Dcp1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778958 GeneID:75901 MGI:1923151
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0000184 - mRNA catabolism, nonsense-mediated decay [Evidence IEA]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] codon_start : 1 note : Smad4-interacting transcriptional co-activator product : MAD homolog 4 interacting transcription coactivator 1 protein_id : NP_598522.3

name	Tkt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678359 CCDS:CCDS26894.1 GeneID:21881 MGI:105992
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004802 - transketolase activity [Evidence IDA] GO_process : GO:0040008 - regulation of growth [Evidence IMP] codon_start : 1 product : transketolase protein_id : NP_033414.1

name	Prkcd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755082 CCDS:CCDS26895.1 GeneID:18753 MGI:97598
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0042100 - B cell proliferation [Evidence IMP]; GO:0016064 - immunoglobulin mediated immune response [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : protein kinase C[d]; protein kinase C, delta IV; protein kinase C, delta V product : protein kinase C, delta protein_id : NP_035233.1

name	EG665466 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94396855 GeneID:665466 MGI:3646878
definition	codon_start : 1 product : hypothetical protein protein_id : XP_982225.1

name	Rft1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87299621 CCDS:CCDS26896.1 GeneID:328370 MGI:3607791
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0000280 - nuclear division [Evidence IEA] codon_start : 1 product : RFT1 homolog protein_id : NP_808483.2

name	Sfmbt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9507089 CCDS:CCDS26897.1 GeneID:54650 MGI:1859609
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 note : Scm-related gene containing four mbt domains 1 product : Scm-like with four mbt domains 1 protein_id : NP_062333.1

name	Tmem110 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980784 CCDS:CCDS26899.1 GeneID:69179 MGI:1921500
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC69179 protein_id : NP_083115.2

name	Mustn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088922 GeneID:66175 MGI:1913425
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] codon_start : 1 product : musculoskeletal, embryonic nuclear protein 1 protein_id : NP_852055.1

name	Itih4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055252 CCDS:CCDS26901.1 GeneID:16427 MGI:109536
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IDA]; GO:0005540 - hyaluronic acid binding [Evidence IDA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030212 - hyaluronan metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : PK-120 product : inter alpha-trypsin inhibitor, heavy chain 4 protein_id : NP_061216.1

name	Itih3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680496 GeneID:16426 MGI:96620
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030212 - hyaluronan metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : inter-alpha trypsin inhibitor, heavy chain 3 protein_id : NP_032433.1

name	Itih1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249351 GeneID:16424 MGI:96618
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030212 - hyaluronan metabolism [Evidence IEA] codon_start : 1 note : inter-alpha (globulin) inhibitor, H1 polypeptide product : inter-alpha trypsin inhibitor, heavy chain 1 protein_id : NP_032432.2

name	Nek4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754822 CCDS:CCDS26902.1 GeneID:23955 MGI:1344404
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 note : NIMA-related expressed kinase 4 product : NIMA (never in mitosis gene a)-related expressed kinase 4 protein_id : NP_035979.1

name	Spcs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16975492 CCDS:CCDS26903.1 GeneID:69019 MGI:1916269
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA]; GO:0005787 - signal peptidase complex [Evidence ISS] [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0009003 - signal peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence ISS]; GO:0006465 - signal peptide processing [Evidence IEA] codon_start : 1 exception : mismatches in translation product : signal peptidase 12kDa protein_id : NP_081187.1

name	Glt8d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313216 CCDS:CCDS26904.1 GeneID:76485 MGI:1923735
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0016051 - carbohydrate biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glycosyltransferase 8 domain containing 1 protein_id : NP_083902.1

name	Gnl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281913 GeneID:30877 MGI:1353651
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005730 - nucleolus [Evidence IDA] [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence ISS] [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0042127 - regulation of cell proliferation [Evidence ISS]; GO:0000074 - regulation of progression through cell cycle [Evidence ISS] codon_start : 1 note : short isoform is encoded by transcript variant 2; nucleostemin product : guanine nucleotide binding protein-like 3 (nucleolar) short isoform protein_id : NP_849174.1

name	Gnl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30524920 CCDS:CCDS26905.1 GeneID:30877 MGI:1353651
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005730 - nucleolus [Evidence IDA] [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence ISS] [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0042127 - regulation of cell proliferation [Evidence ISS]; GO:0000074 - regulation of progression through cell cycle [Evidence ISS] codon_start : 1 note : long isoform is encoded by transcript variant 1; nucleostemin product : guanine nucleotide binding protein-like 3 (nucleolar) long isoform protein_id : NP_705775.2

name	Pbrm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486951 GeneID:66923 MGI:1923998
definition	GO_component : GO:0000776 - kinetochore [Evidence IDA]; GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007507 - heart development [Evidence IMP]; GO:0001890 - placenta development [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : 2310032M22Rik product : polybromo 1 protein_id : NP_001074720.1

name	EG432834 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63663484 GeneID:432834 MGI:3643518
definition	codon_start : 1 product : hypothetical protein protein_id : XP_484358.2

name	Nt5dc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625755 GeneID:70021 MGI:1917271
definition	GO_function : GO:0008253 - 5'-nucleotidase activity [Evidence IEA] codon_start : 1 product : 5'-nucleotidase domain containing 2 protein_id : NP_081565.1

name	Stab1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20149762 CCDS:CCDS26906.1 GeneID:192187 MGI:2178742
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008367 - bacterial binding [Evidence ISS]; GO:0005041 - low-density lipoprotein receptor activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005044 - scavenger receptor activity [Evidence ISS] GO_process : GO:0007155 - cell adhesion [Evidence ISS]; GO:0007267 - cell-cell signaling [Evidence ISS]; GO:0042742 - defense response to bacterium [Evidence ISS]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0016525 - negative regulation of angiogenesis [Evidence ISS]; GO:0006898 - receptor mediated endocytosis [Evidence ISS] codon_start : 1 exception : mismatches in translation note : stabilin-1 product : stabilin 1 protein_id : NP_619613.1

name	Nisch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114158672 GeneID:64652 MGI:1928323
definition	GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0005178 - integrin binding [Evidence IDA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IDA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0030336 - negative regulation of cell migration [Evidence IDA]; GO:0016601 - Rac protein signal transduction [Evidence IDA] codon_start : 1 note : imidazoline receptor I-1-like protein product : nischarin protein_id : NP_073147.2

name	Tnnc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678369 GeneID:21924 MGI:98779
definition	GO_component : GO:0005861 - troponin complex [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence IEA] GO_process : GO:0006937 - regulation of muscle contraction [Evidence IEA] codon_start : 1 product : troponin C, cardiac/slow skeletal protein_id : NP_033419.1

name	Sema3g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794605 CCDS:CCDS26908.1 GeneID:218877 MGI:3041242
definition	GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 note : Semaphorin 3G product : sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G protein_id : NP_001020550.1

name	Phf7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313646 CCDS:CCDS26909.1 GeneID:71838 MGI:1919088
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : PHD finger protein 7 protein_id : NP_082225.1

name	Bap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076917 CCDS:CCDS26910.1 GeneID:104416 MGI:1206586
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004221 - ubiquitin thiolesterase activity [Evidence ISS] GO_process : GO:0008285 - negative regulation of cell proliferation [Evidence ISS]; GO:0016579 - protein deubiquitination [Evidence ISS]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : ubiquitin C-terminal hydrolase X4 product : Brca1 associated protein 1 protein_id : NP_081364.1

name	Dnahc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94396882 GeneID:110084 MGI:107721
definition	codon_start : 1 note : overriding stop codons product : similar to KIAA1410 protein protein_id : XP_982687.1 transl_except : (pos:complement(32082742..32082744),aa:OTHER)

name	Capn7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753258 CCDS:CCDS26911.1 GeneID:12339 MGI:1338030
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0004198 - calpain activity [Evidence IEA]; GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 product : calpain 7 protein_id : NP_033926.1

name	Sh3bp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109150405 GeneID:24056 MGI:1344391
definition	GO_component : GO:0005737 - cytoplasm [Evidence IC]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0004860 - protein kinase inhibitor activity [Evidence ISS]; GO:0017124 - SH3 domain binding [Evidence TAS] [Evidence ISS] GO_process : GO:0007242 - intracellular signaling cascade [Evidence ISS]; GO:0006469 - negative regulation of protein kinase activity [Evidence IDA] codon_start : 1 product : SH3-domain binding protein 5 (BTK-associated) protein_id : NP_036024.2

name	Mettl6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385400 CCDS:CCDS26913.1 GeneID:67011 MGI:1914261
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : methyltransferase like 6 protein_id : NP_080183.1

name	Eaf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229210 CCDS:CCDS26914.1 GeneID:74427 MGI:1921677
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0008134 - transcription factor binding [Evidence ISS]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : ELL associated factor 1 protein_id : NP_083208.1

name	Colq (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114703723 GeneID:382864 MGI:1338761
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0045202 - synapse [Evidence IEA] GO_process : GO:0042135 - neurotransmitter catabolism [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : AChE Q; acetylcholinesterase-associated collagen product : collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase protein_id : NP_034067.1

name	Hacl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560355 CCDS:CCDS26915.1 GeneID:56794 MGI:1929657
definition	GO_component : GO:0005777 - peroxisome [Evidence TAS] [Evidence ISS] GO_function : GO:0016830 - carbon-carbon lyase activity [Evidence ISS] [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IDA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0030976 - thiamin pyrophosphate binding [Evidence ISS] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0001561 - fatty acid alpha-oxidation [Evidence ISS]; GO:0006629 - lipid metabolism [Evidence IDA] codon_start : 1 note : phytanoyl-CoA 2-hydroxylase 2 product : 2-hydroxyphytanoyl-CoA lyase protein_id : NP_064359.2

name	Btd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384648 GeneID:26363 MGI:1347001
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0043204 - perikaryon [Evidence IDA] GO_function : GO:0047708 - biotinidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA] codon_start : 1 product : biotinidase protein_id : NP_079571.1

name	Ankrd28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66841376 GeneID:105522 MGI:2145661
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : ankyrin repeat domain 28 protein_id : NP_001019775.1

name	Galntl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58000467 GeneID:78754 MGI:1926004
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2 protein_id : NP_084442.1

name	Dph3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114145563 GeneID:105638 MGI:1922658
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0050709 - negative regulation of protein secretion [Evidence ISS]; GO:0017183 - peptidyl-diphthamide biosynthesis from peptidyl-histidine [Evidence ISS]; GO:0051099 - positive regulation of binding [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; zinc finger, CSL domain containing 2 product : zinc finger, CSL domain containing 2 isoform 2 protein_id : NP_001040898.1

name	Dph3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986537 GeneID:105638 MGI:1922658
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0050709 - negative regulation of protein secretion [Evidence ISS]; GO:0017183 - peptidyl-diphthamide biosynthesis from peptidyl-histidine [Evidence ISS]; GO:0051099 - positive regulation of binding [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; zinc finger, CSL domain containing 2 product : zinc finger, CSL domain containing 2 isoform 1 protein_id : NP_758458.1

name	Oxnad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703914 CCDS:CCDS26918.1 GeneID:218885 MGI:1916953
definition	codon_start : 1 exception : mismatches in translation product : oxidoreductase NAD-binding domain containing 1 protein_id : NP_663435.1

name	Msmb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10181104 GeneID:17695 MGI:97166
definition	codon_start : 1 note : beta-inhibin; prostatic inhibin protein product : beta-microseminoprotein protein_id : NP_065622.1

name	LOC665399 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665399
definition	number : 1 pseudo : _no_value

name	LOC665399 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665399
definition	number : 2 pseudo : _no_value

clone name	MSMg01-402M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262O04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-292C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257O13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-271H21.T7 (MSMg01no271_h21.b1)	MSMg01-271H21.TJ (MSMg01no271_h21.g1)
ACC	AG411029	AG411030
length	757	741
length of high quality (start - end)	322 (40 - 361)	209 (442 - 650)
definition	CHROMAT_FILE: MSMg01no271_h21.b1 PHD_FILE: MSMg01no271_h21.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:10:22 2005	CHROMAT_FILE: MSMg01no271_h21.g1 PHD_FILE: MSMg01no271_h21.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:10:23 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA TAATCCTCTTGCTTCAATCTCCAATTGCTGAGGTCTACTTTAATAGGTGT TCAAACATAGCTTGGGATTATTCAGCAAAGATGAAATAATTCATAGAATG ATAGAGTAATAAAATTTTCTACCACATGGGGAAAAAGTAGCTTGTAATTC AAATGTAGCTTGTATTATAAAGGATCCAATTGGAACAATATGGTAATTGC TGGATAGAATGAGTTTTATAATATATATCCTCAATTGTATAGTATGTATC ATTAGCATATATTAACTATACATAATAATAGGCTTCATGATAACATTTTG TGTTGGTTGTANATCACTACAGGACCTATCCAAAAGACACAAGAAACTAA GACCTCAGAATAATAAATAGCCTTAATGAATGTAGACNAAGATGTACTCA ATGTAATACTATCAAACTGAACATAATAATATATCAAACACATATATCAT GACAGTGTGGTTGCTGTCACAAATGTGTGACTTAATATCTAAAATATTAT GTTGTGTCTATCATATATATACTTTCAAATTTCCTGCTCTGTGTGCACGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTNNNNNNNNNNNNNN NNNTTTNTTTTTTTTTTNTTTTTTTTTTTTTNTNTTTTTTTTTTTCTNTT TTTTTTTTTTNNNTTTNTTTTTTTTTTTTTTTCTTTTTTTTCNTTTNTNT TTTTTTN	TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXTCCCGAAAATCCAGGAATCTACCCATCTCTCTCCTCCTCTCCAAC TAACCTAGAGCTGAGCCCCGGGCCCAGCACACAGTAGGTGCCTTGTTAAA CACCCTTCCTCCTCTTTTCCTGAGCCTACTGCTCTGTAGGACACAGCAGG TTTGTGGGTTACCGGATACTTTGTTTGCTCCCACCTGGAGGTCGGTGAGT TTCCTCTGGGTTCCCCTCCACCCTCCGGAAAGTGCAAAGAAGCGAGTGGA GCCATACCGGCAGTTCTTTTTATCTTCTCTGGGAAATTCCGAGACCAGCC CCATTGACATAGCTCNAAACGANAGCCGCAANGNCGTANAGGGGGGGNGA GNGAAAACTTGGAGAGGNTGACGCNNAAATTAGACCGGGGCTGGGACATA GGCAAAATGCACAGTGAGGGGCCTGAGTCTATACCAACTGCACAGTTTCC CTTCAGTTCAGTGGGAATGAGCAAGGCCAGGGAAGGTCCTAGGAAACCTC GTTGTCACCTCCTGTCCCCATGTCTGTGGCTGAAAGCCTTCAGGTTTTCT CTTTCTCCAGAGGAATCATTTCCATCTAAGGGGAGGAGCTTGAAGTCCCA AACTGTCATATGTATAGGGTGCAAAGCAGGTATAAGAGCTCCCTGCCTTC TTGGTCCAAATAGACACGTCACAAGCCTCACACTGTGTATN
quality values	Open. Hide. 18 22 30 30 37 37 37 31 30 37 37 37 37 37 39 39 44 44 43 35 28 30 32 32 35 48 53 53 48 43 46 46 48 48 42 37 28 26 26 32 41 34 43 42 47 47 47 50 50 54 54 47 54 54 57 68 68 68 68 68 68 68 51 51 50 50 50 51 68 48 48 50 50 46 48 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 51 51 51 51 51 68 68 68 68 68 68 68 68 68 68 57 57 57 57 50 50 50 50 50 50 68 68 68 51 51 51 50 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 32 32 20 20 20 24 28 31 43 43 57 57 68 57 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 27 27 11 16 11 3 0 3 7 7 7 9 9 20 9 9 6 6 6 6 6 6 6 6 7 8 8 11 18 19 10 10 9 17 15 37 37 43 43 57 57 57 57 57 57 57 53 53 53 53 57 57 59 59 59 59 59 59 59 48 59 48 43 27 24 15 12 13 10 10 10 10 10 15 16 16 12 15 11 27 27 3 0 3 27 22 34 36 30 35 35 34 34 28 39 43 43 57 59 59 59 59 59 59 59 59 59 59 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 68 68 68 59 59 59 59 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 59 59 59 59 57 57 54 57 57 48 48 48 50 57 68 68 68 68 68 68 68 59 59 57 57 54 54 54 48 48 48 46 46 47 47 48 48 48 59 57 57 57 57 57 57 50 50 59 59 59 59 59 59 37 37 32 29 29 30 39 44 59 59 59 59 46 48 48 59 59 48 59 59 59 59 59 59 57 48 59 59 59 59 59 59 59 59 59 59 57 48 48 48 57 48 48 48 59 59 59 57 57 50 47 47 39 48 48 46 46 46 41 34 23 20 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 3 0 3 9 9 12 9 12 16 15 6 3 0 3 8 9 19 23 9 9 9 17 19 21 15 3 0 3 0 3 10 8 8 8 8 15 15 12 11 8 8 3 0 3 8 6 6 6 6 10 16 15 18 12 3 0 0 0 3 9 3 0 3 6 7 7 9 14 9 9 9 9 9 9 8 8 8 8 10 10 10 15 11 10 10 10 3 0 3 10 3 0 3 0 3 12 12 12 15 11 3 0	Open. Hide. 11 11 23 17 21 12 11 11 26 30 50 50 50 50 53 48 48 47 47 47 59 43 27 18 9 9 9 7 7 6 6 6 6 8 8 8 8 15 3 0 3 12 10 22 22 37 37 37 42 34 27 18 9 9 9 9 9 9 11 12 15 13 10 12 10 10 13 17 20 28 33 33 33 36 36 59 53 50 38 38 42 42 57 57 57 57 59 59 59 59 59 59 59 59 47 47 37 37 37 38 57 57 57 57 59 59 59 41 32 17 17 11 15 11 11 12 23 17 11 11 11 22 25 39 42 47 47 48 50 53 53 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 59 68 68 68 68 68 68 59 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 47 51 51 47 47 68 68 68 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 50 50 53 47 41 50 59 59 34 25 13 13 10 10 10 18 25 41 47 59 59 59 59 59 59 59 59 57 57 57 53 53 53 57 57 57 59 59 59 57 57 57 57 68 68 68 68 68 68 57 57 59 59 57 57 57 57 57 57 57 48 48 59 59 59 59 59 59 59 59 59 59 59 59 59 27 23 12 9 9 9 12 16 16 9 9 9 15 15 33 30 59 59 59 59 59 59 50 57 57 57 57 57 59 59 53 53 50 50 50 50 47 34 27 20 9 9 9 9 9 9 7 7 7 7 7 9 9 3 0 3 9 9 9 9 3 0 3 7 9 9 8 8 10 3 0 3 0 3 12 18 3 0 3 13 8 9 9 7 7 3 0 3 27 3 0 3 21 21 30 30 30 29 27 23 15 9 11 9 9 3 0 3 9 9 9 9 3 0 0 3 9 9 12 22 23 15 13 12 12 13 15 14 14 14 13 18 28 28 42 42 43 43 59 59 59 59 59 48 57 48 48 48 57 57 57 59 59 59 59 59 59 59 54 54 54 57 57 68 68 68 57 59 57 57 68 57 57 57 59 59 47 47 39 39 35 35 35 37 37 59 59 57 57 59 48 53 47 47 47 53 57 57 57 57 59 59 59 57 39 39 39 39 35 39 39 37 34 33 28 24 30 34 32 33 31 33 33 33 37 36 36 37 39 39 39 43 39 39 42 42 42 37 40 35 35 42 42 43 43 43 43 43 46 57 43 43 37 36 43 43 43 48 43 43 43 47 47 59 40 34 31 25 25 25 34 36 37 41 41 34 34 37 37 37 32 31 31 37 37 37 34 37 35 31 31 34 34 37 37 37 37 37 37 37 43 48 48 48 43 43 43 39 43 24 24 17 17 17 23 21 19 12 12 12 12 19 28 34 39 41 47 47 41 39 39 31 31 35 28 28 23 21 11 19 10 10 8 10 10 6 6 6 6 6 8 8 8 8 8 8 10 11 13 10 10 10 21 21 11 11 9 8 8 8 8 8 8 8 24 28 31 31 30 33 28 28 21 13 13 10 15 14 16 18 14 16 19 16 19 24 14 14 9 9 9 9 12 11 11 12 22 19 28 28 28 27 25 17 10 9 10 8 8 6 6 8 8 12 12 10 10 8 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no271_h21.g1 MSMg01no271_h21.g1 CHROMAT_FILE:
MSMg01no271_h21.g1 PHD_FILE: MSMg01no271_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:23 2005
         (209 letters)



>mm_chr14_31976922_31977530
          Length = 609

 Score =  404 bits (209), Expect = e-117
 Identities = 209/209 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgggacataggcaaaatgcacagtgaggggcctgagtctataccaactgcacagtttccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggacataggcaaaatgcacagtgaggggcctgagtctataccaactgcacagtttccc 260

                                                                       
Query: 61  ttcagttcagtgggaatgagcaaggccagggaaggtcctaggaaacctcgttgtcacctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcagttcagtgggaatgagcaaggccagggaaggtcctaggaaacctcgttgtcacctc 320

                                                                       
Query: 121 ctgtccccatgtctgtggctgaaagccttcaggttttctctttctccagaggaatcattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtccccatgtctgtggctgaaagccttcaggttttctctttctccagaggaatcattt 380

                                        
Query: 181 ccatctaaggggaggagcttgaagtccca 209
           |||||||||||||||||||||||||||||
Sbjct: 381 ccatctaaggggaggagcttgaagtccca 409


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 609
Length adjustment: 9
Effective length of query: 200
Effective length of database: 600
Effective search space:   120000
Effective search space used:   120000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information