Query= MSMg01no272_g02.b1 MSMg01no272_g02.b1 CHROMAT_FILE:
MSMg01no272_g02.b1 PHD_FILE: MSMg01no272_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:31 2005
(294 letters)
>mm_chr14_11117962_11118655
Length = 694
Score = 466 bits (241), Expect = e-136
Identities = 268/281 (95%), Gaps = 8/281 (2%)
Strand = Plus / Plus
Query: 1 tcaagtggtgcctttaaatattgaaccaggaagtggggaaggagacagcctcccatggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaagtggtgcctttaaatattgaaccaggaagtggggaaggagacagcctcccatggga 260
Query: 61 ggcatgaaaaagaaaggagacagataaagactgtggccagaataggagacagaaaaccct 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 ggcatgaaaaagaaaggagacagataaagactgtggccagaacaggagacagaaaaccct 320
Query: 121 gacagcagaaattacacaggagactggccagggacatggcatgagaaccactcttgaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gacagcagaaattacacaggagactggccagggacatggcatgagaaccactcttaaaga 380
Query: 181 aaatgttctcatctgtcacaaaactaccctctacaattatcatatcttgaaaacaaaaaa 240
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaggttctcatctgtcacaaaattaccctctacaattatcatatcttgaaaacaaaaaa 440
Query: 241 aacaaaaagacaaatatactaaacaaaacaaaacaa-aaca 280
| |||||||||||| ||||||||||||||| ||||
Sbjct: 441 accaaaaagacaaa-------aacaaaacaaaacaacaaca 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no272_g02.g1 MSMg01no272_g02.g1 CHROMAT_FILE:
MSMg01no272_g02.g1 PHD_FILE: MSMg01no272_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:31 2005
(286 letters)
>mm_chr14_11261914_11262598
Length = 685
Score = 445 bits (230), Expect = e-129
Identities = 266/282 (94%), Gaps = 8/282 (2%)
Strand = Plus / Minus
Query: 1 ttaactctggctccatttattcctgcttcctccagaaagagagtgcttagagttatgtct 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 478 ttaactctggctccattt-------cttcctccagaaagagagtgcttagagttatgtct 426
Query: 61 atcatcaaaggagaagaagaattagtgaagagatcagagggcatccagtgttataaatta 120
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 425 atcatcaaaggagaagaagaattagtgaagagatcagagggcatcc-gtgttataaattg 367
Query: 121 tttgcagactagacaaatgcaaaaatatgtaatagaactatatgagtttattggcaagag 180
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tttgcagactagacgaatgtaaaaatatgtaatagaactatatgagtttattggcaagag 307
Query: 181 tggaatgttagaaggaaggaaattcacggcagggtagccagtatacagggcaaacactgg 240
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 306 tggaatgttagaaggaaggaaattcacggcagggtagccaggatacaggggaaacactgg 247
Query: 241 atataagtattccttaagagctgaatgaatgaatgaatgaat 282
||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 246 atataagtaagccttaagagctgagtgaatgaatgaatgaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
