Query= MSMg01no273_g08.b1 MSMg01no273_g08.b1 CHROMAT_FILE:
MSMg01no273_g08.b1 PHD_FILE: MSMg01no273_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:46 2005
(313 letters)
>mm_chr14_84850392_84851105
Length = 714
Score = 563 bits (291), Expect = e-165
Identities = 306/311 (98%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 5 gaattcaataaattaatatctttggaaatgtaccacatttctctcatatttattat-aaa 63
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 204 gaattcaataaattaatatctttggaaatgtaccacatttctcttatatttattataaaa 263
Query: 64 atcataataaattagccagttgatgtgcct-cccccctcctcttttccctcaacaattgg 122
|||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 264 atcataataaattagccaattgatgtgcctcccccccttctcttttccctcaacaattgg 323
Query: 123 gcagtaatgcatattgtgctcaagtggaatgaaggaagtctgcaggaattccatagtctt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcagtaatgcatattgtgctcaagtggaatgaaggaagtctgcaggaattccatagtctt 383
Query: 183 gtatctagctcatttgttagcatttgcatcagtcggcctgccacttaaatatgctactaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtatctagctcatttgttagcatttgcatcagtcggcctgccacttaaatatgctactaa 443
Query: 243 tttcatgtctctttcttaaagtagactcgtattcccccaaatcaaattggatcaacagct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttcatgtctctttcttaaagtagactcgtattcccccaaatcaaattggatcaacagct 503
Query: 303 tgtagctctgg 313
|||||||||||
Sbjct: 504 tgtagctctgg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 714
Length adjustment: 9
Effective length of query: 304
Effective length of database: 705
Effective search space: 214320
Effective search space used: 214320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_g08.g1 MSMg01no273_g08.g1 CHROMAT_FILE:
MSMg01no273_g08.g1 PHD_FILE: MSMg01no273_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:46 2005
(287 letters)
>mm_chr14_84906292_84906978
Length = 687
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%)
Strand = Plus / Minus
Query: 1 acctcagagtgggataacgtaaatgtgtatattctgagtgagtctcattgctcaatgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 acctcagagtgggataacgtaaatgtgtatattctgagtgagtctcattgctcaatgatt 427
Query: 61 tcttcataatagctaaattctctttactacctgggtaaaattatgaaatttaaaaaattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcttcataatagctaaattctctttactacctgggtaaaattatgaaatttaaaaaattg 367
Query: 121 gaatcatgaaaaatataatgtgtcttttggtgttgttcagaaacacaaacaaacagcggt 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gaattatgaaaaatataatgtgtcttttggtgttgttcagaaacacaaacaaacagcggt 307
Query: 181 caatagtccatacattaccagtttcccaaggaaatgaaaaataatcagtatgattttgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 caatagtccatacattaccagtttcccaaggaaatgaaaaataatcagtatgattttgta 247
Query: 241 gccctctgatggctggggtttgatgtctgattttgctttaagctgg 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gccctctgatggctggggtttgatgtctgattttgctttaagctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
