Query= MSMg01no274_a13.b1 MSMg01no274_a13.b1 CHROMAT_FILE:
MSMg01no274_a13.b1 PHD_FILE: MSMg01no274_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:31 2005
(668 letters)
>mm_chr14_111704491_111705562
Length = 1072
Score = 1152 bits (596), Expect = 0.0
Identities = 652/672 (97%), Gaps = 4/672 (0%)
Strand = Plus / Minus
Query: 1 tagttcaaatagttttcataatttcctgactgtgagtgagccaaatgtagacacatttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 tagttcaaatagttttcataatttcctgactgtgagtgagccaaatgtagacacatttct 813
Query: 61 aggcaatatgaacaagtcattaattctcagttatgtctaaaagtgctaatattccatcaa 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 812 aggcaatatgaacaagtcattaattctcagttatgtctaaaggtgctaatattccatcaa 753
Query: 121 gcagagctctgtgatactgtgatcaccaaagaccatgtttgctgtcagcagactcaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gcagagctctgtgatactgtgatcaccaaagaccatgtttgctgtcagcagactcaatgc 693
Query: 181 ttgacactaagtatataaatcagagaattgtcagacttatcatacttatgcccaagtatg 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 692 ttgacactaagtatataaatcagagaattgtcagaattatcatacttatgcccaagtatg 633
Query: 241 aatttccactgtttgacatgtaatctgaataatgagctgccaaaaaatgataaact---a 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 632 aatttccactgtttgacatgtaatctgaataatgagctgccaaaaaatgataaactaaga 573
Query: 298 agaaagtagaaaagatgtattattcagctaaaggtgaatcaacagaaatttcttgggtgt 357
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 572 agaaagtagaaaagatgtattattcagctaaaggggaatcaagggaaatttcttgggtgt 513
Query: 358 gtgatgccttattaaagattttgatgtacaaaacaaatttacatgagatgaacttcacct 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 512 gtgatgccttattaaagattttgatgtacaaaacaaatttacatgagatgaacttcactt 453
Query: 418 gaatttttattttcctacaataactcattctaaagtgccttt-tactgaattagtagtta 476
|||||||||||||||||| || ||||||||||||| |||||| |||||||||||||||||
Sbjct: 452 gaatttttattttcctacgatcactcattctaaagcgcctttctactgaattagtagtta 393
Query: 477 tctctcctaagaaacgttttataacacaccaaattaacttatgaagaattacttctttat 536
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tctctcctaagaaatgttatataacacaccaaattaacttatgaagaattacttctttat 333
Query: 537 tcattctttgaaaaggaagaagtctttctttgcttgctatgatgattgttgacaatcccc 596
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 332 tcattctttgaaaaggaagaagtctttctttggttgctatgatgattgttgacaatcccc 273
Query: 597 aacatattactttcattatatgcacaaatacattttactacccaataaattggaatgcta 656
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 272 aatgtattgctttcattatatgcacaaatacattttactacccaataaattggaatacta 213
Query: 657 tcaatgtatcat 668
||||||||||||
Sbjct: 212 tcaatgtatcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1072
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1062
Effective search space: 698796
Effective search space used: 698796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_a13.g1 MSMg01no274_a13.g1 CHROMAT_FILE:
MSMg01no274_a13.g1 PHD_FILE: MSMg01no274_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:31 2005
(361 letters)
>mm_chr14_111513241_111514002
Length = 762
Score = 669 bits (346), Expect = 0.0
Identities = 358/362 (98%), Gaps = 1/362 (0%)
Strand = Plus / Plus
Query: 1 cctagtaattaagtgacatttaactgttgtttcactgaaattactgctgggaagtaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctagtaattaagtgacatttaactgttgtttcactgaaattactgctgggaagtaccca 260
Query: 61 gttaacatttacaatggattgggcccaaccacaaagagatattccaccagttctccttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaacatttacaatggattgggcccaaccacaaagagatattccaccagttctccttta 320
Query: 121 cagatatccacaaagtaaatatgattaattattctcatacttagagaagaatctcaaata 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 cagatatccacaaagtaaatatgattaattattctcatacatagagaagaatctcaaata 380
Query: 181 tagcaatcatcagctaaacaaacaaaaatcctaagtaaacagaaatatgaaataaaatca 240
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 tagaaatcatcagctaaacaaacaaaaatcctaagtaaacagagatatgaaataaaatca 440
Query: 241 gaaacaagataaaaa-tgtaaaataaattaaatgtaatctaatctatagtttcaaaattc 299
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaacaagataaaaaatgtaaaataaattaaatgtaatctaatctatagtttcaaaattc 500
Query: 300 tggtaaaacgttgctcagactgtaagacactgcagtaggtagaattagggaacaataata 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggtaaaacgttgctcagactgtaagacactgcagtaggtagaattagggaacaataata 560
Query: 360 ca 361
||
Sbjct: 561 ca 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 762
Length adjustment: 9
Effective length of query: 352
Effective length of database: 753
Effective search space: 265056
Effective search space used: 265056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
