Query= MSMg01no274_b18.b1 MSMg01no274_b18.b1 CHROMAT_FILE:
MSMg01no274_b18.b1 PHD_FILE: MSMg01no274_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:36 2005
(321 letters)
>mm_chr14_51696963_51697683
Length = 721
Score = 553 bits (286), Expect = e-162
Identities = 307/314 (97%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaatggttacaccgaaacagagaaagggaactaaaagtgccattaggcttttaa 64
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 206 gaattcaaatggttacagggaaacagagaaagggaactaaaagtggcattaggcttttaa 265
Query: 65 tctcaaagtctgtcccctagtgacattcttccatcagcaaggctgcaccaactaaccctc 124
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tctcaaactctgtcccctagtgacattcttccatcagcaaggctgcaccaactaaccctc 325
Query: 125 cccaaacagcgtcaccaactggagaccaagtgttcaaacacccaagcccacgagggaaag 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 326 cccaaacagcgtcaccaactggagaccaagcgttcaaacacccaagcccacgagg-aaag 384
Query: 185 ttctcactgaggctatctcatgctctaaatgcagagaggaaagcagggtaaatatataat 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 385 ttctcactgaggctatctcatgctctaaatgcagagaggaaagcagggtaaatatagaat 444
Query: 245 agtggcaatcgagtctctgtgagatgacttagtttttagaaatacagtatttcctatcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtggcaatcgagtctctgtgagatgacttagtttttagaaatacagtatttcctatcag 504
Query: 305 gagatagggagatg 318
||||||||||||||
Sbjct: 505 gagatagggagatg 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_b18.g1 MSMg01no274_b18.g1 CHROMAT_FILE:
MSMg01no274_b18.g1 PHD_FILE: MSMg01no274_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:36 2005
(288 letters)
>mm_chr14_44471966_44472653
Length = 688
Score = 451 bits (233), Expect = e-131
Identities = 275/289 (95%), Gaps = 2/289 (0%)
Strand = Plus / Plus
Query: 1 agaacaagtcacagctgagtggagacctaaaagaagagtgga-tgttgaccaaataaaat 59
|||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||
Sbjct: 201 agaacaagtcacagctgagtggagacctaaaagaagagtg-agtgttgaataaataaaat 259
Query: 60 tgagagaaagagctcttcaaggaaacgcagtagcactgcatctttaagtgacccatccat 119
||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 260 ggagagaaagagctctccaaggaaacacagtagtgctgcatctttcagtgacccatccat 319
Query: 120 gagagcaggaacagctgcccagccctgggagccccagaggaccacctgccatgagcagat 179
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 320 gagagcaggaacagctgcccagccctgggagtcccagaggaccacctgccatgagcagat 379
Query: 180 cactggagaactcagagaatagaggagcaaggagaccagatcaagaagcagcttgggttt 239
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cactggagaagtcagagaagagaggagcaaggagaccagatcaagaagcagcttgggttt 439
Query: 240 actctggaggattaaagccttttaattacagggtcagatcactcagtca 288
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 440 actctggaggattaaagccttttaattacatggtcagatcactcagtca 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
