Query= MSMg01no274_g01.b1 MSMg01no274_g01.b1 CHROMAT_FILE:
MSMg01no274_g01.b1 PHD_FILE: MSMg01no274_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:54 2005
(594 letters)
>mm_chr14_118906373_118907366
Length = 994
Score = 1075 bits (556), Expect = 0.0
Identities = 583/592 (98%)
Strand = Plus / Plus
Query: 3 gacattgagtctctaggagagtttgaggtttgcaaaggacaagcaagataccgtattggc 62
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 203 gacattgagtctctaggagagtttgaggtttgcaaaggacaagcaagataatgtattggc 262
Query: 63 taagtcagatttggggaagttaaaatgcagcatgatgcatattattttatacacacttca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 taagtcagatttggggaagttaaaatgcagcatgatgcatattattttatacacacttca 322
Query: 123 cgcccattcacaaacatcaatgctcctccaagtgggaactaaaggtagatccagcactga 182
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 323 cgcccattcacaaacatcaatgctcctccaagtgggaactaaagatagttccagcactga 382
Query: 183 cccctgcttccccaagtgctctcaacagaagcacacacagatgctaacggtggaagttac 242
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 383 cccctgcttccccaagtgctctcaacagaggcacacacagatgctaacggtggaagttac 442
Query: 243 ctcctccaaagccctccacagctcctcgtccgtgtgctcattgaaggggtccaggttttt 302
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctcctccaaggccctccacagctcctcgtccgtgtgctcattgaaggggtccaggttttt 502
Query: 303 cctcatggttccagtgaacagaacaggttcctaagagcccaagagagtcaatgtcactgc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cctcatggttccagtgaacagaacaggttcctaagagcccaagagagtcaatgtcactgc 562
Query: 363 cacgttctgactttcaggacgtcatagaaaggaaaacaaaggcactcgagtccactaagg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cacgttctgactttcaggacgtcatagaaaggaaaacaaaggcactcgagtccactaagg 622
Query: 423 ttgaacacgctcgctcacaaaatgtcactgttcttaaatttcccatcacataaatgtgct 482
|| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 623 ttcaacacgctcgctcataaaatgtcactgctcttaaatttcccatcacataaatgtgct 682
Query: 483 ccaaaataccttcccagtgcacggaacgctcaaagaagaaaccgtggcagtgtgccgtct 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ccaaaataccttcccagtgcacggaacgctcaaagaagaaaccgtggcagtgtgccgtct 742
Query: 543 taagaacgaaatgaggaaggtgggttcctgttgttaaaaacactttcctggt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 taagaacgaaatgaggaaggtgggttcctgttgttaaaaacactttcctggt 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_g01.g1 MSMg01no274_g01.g1 CHROMAT_FILE:
MSMg01no274_g01.g1 PHD_FILE: MSMg01no274_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:54 2005
(350 letters)
>mm_chr14_119055868_119056616
Length = 749
Score = 638 bits (330), Expect = 0.0
Identities = 345/350 (98%), Gaps = 1/350 (0%)
Strand = Plus / Minus
Query: 1 ggattagacctctctaatcctccagctcattggaggagggtaaggcattggctaacaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ggattagacctctctaatcctccagctcattggaggagggtaaggcattggctaacaccg 490
Query: 61 acccatcaagagcccataaacttaaggggattgttagaaggcacaacccagctgggacac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acccatcaagagcccataaacttaaggggattgttagaaggcacaacccagctgggacag 430
Query: 121 acacacatgattattctgcaatggagacctgcctctagtggctacctcttttcctgtatt 180
||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 429 acacaca-gatgattctgcaaaggagacctgcctctagtggctacctcttttcctgtatt 371
Query: 181 taccaagccttctgttgttttctctgacactctcatggtccacgattcacacccagtcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 taccaagccttctgttgttttctctgacactctcatggtccacgattcacacccagtcag 311
Query: 241 gagaactgtgcagcagacgacaactgcaggcctgcatttggagtctcaggcaaagtggaa 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gagaattgtgcagcagacgacaactgcaggcctgcatttggagtctcaggcaaagtggaa 251
Query: 301 agagttacccctgggctcctggtgaagggtccaggctagcgtgctctggc 350
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agagttacccctgggctcctggtgaagggtccaggctagcgtgctctggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 749
Length adjustment: 9
Effective length of query: 341
Effective length of database: 740
Effective search space: 252340
Effective search space used: 252340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
