Query= MSMg01no274_l10.b1 MSMg01no274_l10.b1 CHROMAT_FILE:
MSMg01no274_l10.b1 PHD_FILE: MSMg01no274_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:18 2005
(273 letters)
>mm_chr14_56181893_56182566
Length = 674
Score = 489 bits (253), Expect = e-143
Identities = 265/269 (98%), Gaps = 1/269 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggagatgagggactccttggagcca-ccacatcgagtgggctcagttttacta 63
||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 gaattcaggagatgaggaaatccttggagccaaccacatcgagtgggctcagttttacta 264
Query: 64 tctcgtgtctgggctcgaagccctagaacaaaactttttttggtactcccagtggatgcg 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctcgtgtctgggctggaagccctagaacaaaactttttttggtactcccagtggatgcg 324
Query: 124 acccccgacacccgggagctggaatacaatgagatcaagacacaggtgggattggccacg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acccccgacacccgggagctggaatacaatgagatcaagacacaggtgggattggccacg 384
Query: 184 gggcggctgggacttcggaggactgcgctgcagcagagttttccgcagatgttacaccag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggcggctgggacttcggaggactgcgctgcagcagagttttccgcagatgttacaccag 444
Query: 244 gtaggctcttctgcctccactcagcctgg 272
|||||||||||||||||||||||||||||
Sbjct: 445 gtaggctcttctgcctccactcagcctgg 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 674
Length adjustment: 9
Effective length of query: 264
Effective length of database: 665
Effective search space: 175560
Effective search space used: 175560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no274_l10.g1 MSMg01no274_l10.g1 CHROMAT_FILE:
MSMg01no274_l10.g1 PHD_FILE: MSMg01no274_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:18 2005
(289 letters)
>mm_chr14_56349624_56350311
Length = 688
Score = 489 bits (253), Expect = e-143
Identities = 280/289 (96%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 tatgtttaccaagtagctgctacagtgaaggaaccttgatggggaagagaaatgcaggca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 488 tatgtttaccaagtagctgctacagtgaaggaaccttgat-gggaagagaaatgcaggca 430
Query: 61 aatacatctctttgggtagtttacagcagaattggaagcagggctctgcaccccacacga 120
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 429 aatacatttctttgggtagtttacagcagaattggaagcagggccctgcaccccacacga 370
Query: 121 tgaactagaatgtagtcacaggaccataagacctggtgccaagaggtacagaaaagatgt 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 369 tgaactagaatgtagtcacaggaccataagacctggtgccaagaggcacagaaaagatgt 310
Query: 181 gtaaacaagccccaagccagcccagctctgggctctcttcttgcaagaagcctaccttat 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaaacaagccccaagccagcccagctctgggctctcttcttgcaagaagcctaccttat 250
Query: 241 tcctagacaatgcagcaccccagctcagcacacccagtaccacgtgctt 289
|||||||||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 249 tcctagacaacgcagtgctccagctcagcacacccagtaccacgtgctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
