Query= MSMg01no274_p14.b1 MSMg01no274_p14.b1 CHROMAT_FILE:
MSMg01no274_p14.b1 PHD_FILE: MSMg01no274_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:37 2005
(239 letters)
>mm_chr14_29464565_29465203
Length = 639
Score = 426 bits (220), Expect = e-124
Identities = 235/240 (97%), Gaps = 2/240 (0%)
Strand = Plus / Minus
Query: 1 ctgatgcttgcaaaggaaaaacaaaaacaaacaaacaaaaacctgctgccattgtatccc 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 353 ctgatgcttgcaaaggaaaaacaaaaacaaacaaacaaaaacctgctggtattgtatccc 294
Query: 61 atcctccct-cagcgttatctaagtgtatgtatatgtatagcatatctttctggagcact 119
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atcct-cctgcagcgttatctaagtgtatgtatatgtatagcatatctttctggagcact 235
Query: 120 gaggaagcccctattgacattactagacaactaagatagtcagattgacagatactataa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 234 gaggaagcccctattgacattactagacaactaagatagtcagattgacagatactagaa 175
Query: 180 tcacctagggaatgggtctctgggcatacttctgggagatatcttgattacactcaggta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tcacctagggaatgggtctctgggcatacttctgggagatatcttgattacactcaggta 115
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no274_p14.g1 MSMg01no274_p14.g1 CHROMAT_FILE:
MSMg01no274_p14.g1 PHD_FILE: MSMg01no274_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:37 2005
(284 letters)
>mm_chr14_29289796_29290479
Length = 684
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%)
Strand = Plus / Plus
Query: 1 aactcctgctgcttcctctgaagattaaaaagtattagtccttacaactccgtaaacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactcctgctgcttcctctgaagattaaaaagtattagtccttacaactccgtaaacaca 260
Query: 61 cacaactgagcctggtaaatgtgcagctcttgtactgacccattttcctgtcaatgggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaactgagcctggtaaatgtgcagctcttgtactgacccattttcctgtcaatgggag 320
Query: 121 aacccctcccacccacctgcattcctaaaggacaaacaatgaatttaagcatgagtggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacccctcccacccacctgcattcctaaaggacaaacaatgaatttaagcatgagtggcc 380
Query: 181 ttaataaatacccttgtctttctttgctgctgtggaaagggctctaagcagaagttgctg 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 ttaataaatacccttgtctttctttgctgctgtggaaagggttctaagcagaagttgctg 440
Query: 241 aaatcttgtattgactctaatcattattaccttccaaaatgttg 284
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatcttgcattgactctaatcattattaccttccaaaatgttg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
