Query= MSMg01no277_a07.b1 MSMg01no277_a07.b1 CHROMAT_FILE:
MSMg01no277_a07.b1 PHD_FILE: MSMg01no277_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:04 2005
(322 letters)
>mm_chr14_76067932_76068654
Length = 723
Score = 547 bits (283), Expect = e-160
Identities = 311/321 (96%), Gaps = 3/321 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttgttatgtgactgttcagtacccacaggtcagaaac--tgtctcacatggc 61
|||||||||||||||| || |||||||||| |||||||||||||| |||||||||||||
Sbjct: 204 ggaattctttgttatgagattgttcagtacgcacaggtcagaaacagtgtctcacatggc 263
Query: 62 acagatttcactcacaaaaccgcccagataaatccttgaaactagttctctcagaggctg 121
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acagatttcactcacaaaactgcccagataaatccttgaaactagttctctcagaggctg 323
Query: 122 gcaaacttgatgtggaaagaatgctaaagagcacgaaatgactcctggtccatgggggag 181
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 gcaaatttgatgtggaaagaatgctaaagagcac-aaatgactcctggtccatgggggag 382
Query: 182 aaccagaaagactatttacagccccaagagactgtctatctatacatatggtgggtcata 241
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 383 aactagaaagactatttacagccccaagagactgtctatctagacatatggtgggtcata 442
Query: 242 aacaaaggagaccagaaatcctaaccttacatctatgctcaaggaaatcaagcttggtgc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aacaaaggagaccagaaatcctaaccttacatctatgctcaaggaaatcaagcttggtgc 502
Query: 302 ctggcatgtagctagcagcta 322
|||||||||||||||||||||
Sbjct: 503 ctggcatgtagctagcagcta 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 723
Length adjustment: 9
Effective length of query: 313
Effective length of database: 714
Effective search space: 223482
Effective search space used: 223482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_a07.g1 MSMg01no277_a07.g1 CHROMAT_FILE:
MSMg01no277_a07.g1 PHD_FILE: MSMg01no277_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:04 2005
(296 letters)
>mm_chr14_76229120_76229815
Length = 696
Score = 565 bits (292), Expect = e-165
Identities = 295/296 (99%)
Strand = Plus / Minus
Query: 1 ttaattcatttgtttatgtgctcgtgtattaatagattcaattgctaaacactctctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttaattcatttgtttatgtgctcgtgtattaatagattcaattgctaaacactctctcag 437
Query: 61 cagcagatctgcagtactggctgagctcgccatagcaaacaccttttctttctctgtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cagcagatctgcagtactggctgagctcgccatagcaaacaccttttctttctctgtatt 377
Query: 121 ccgaagcagtgggaatgcatagctggagtgaagcattagagagcgctgcagttgtagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ccgaagcagtgggaatgcatagctggagtgaagcattagagagcgctgcagttgtagttc 317
Query: 181 cgcggtgtgtccggcagatggcgatgccgagatcaccgagtgcggtcctcaaagctgaag 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cgcagtgtgtccggcagatggcgatgccgagatcaccgagtgcggtcctcaaagctgaag 257
Query: 241 gtaggaaggatctgatcggtttccaaatgctggatggaaaatcagagcagaacttg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gtaggaaggatctgatcggtttccaaatgctggatggaaaatcagagcagaacttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
