Query= MSMg01no278_k12.b1 MSMg01no278_k12.b1 CHROMAT_FILE:
MSMg01no278_k12.b1 PHD_FILE: MSMg01no278_k12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:03 2005
(262 letters)
>mm_chr14_54028626_54029287
Length = 662
Score = 416 bits (215), Expect = e-121
Identities = 239/247 (96%), Gaps = 2/247 (0%)
Strand = Plus / Minus
Query: 17 gcttatgtccattctagtggaatcatagaaataagtatgccaagaacaccaatctagcgc 76
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 462 gcttatgtccattttagtggaatcatagaaataagtatgccgagaacaccaatctagtgg 403
Query: 77 aggtctacatcatatagttttagagaggaacaataattctattgagagctattttagact 136
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aggcctacatcatatagttttagagaggaacaataattctattgagagctattttagact 343
Query: 137 aatattgggtgcaggcaaagaaaggagcaactgaattgttagtgtctgctctgtggtcta 196
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 342 aatattgggtgcaggcaaagaaaggagcaactgaattgttagtgtctgctttgtggtcta 283
Query: 197 gcacaaagcctgttcattcatgtgtgtgcacaaatgctcacactgtc-agacgtcctctt 255
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 282 gcacaaagcctgttcattcatgtgtgtgcacaaatgctcacactg-ctagacgtcctctt 224
Query: 256 tcatgaa 262
|||||||
Sbjct: 223 tcatgaa 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 662
Length adjustment: 9
Effective length of query: 253
Effective length of database: 653
Effective search space: 165209
Effective search space used: 165209
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no278_k12.g1 MSMg01no278_k12.g1 CHROMAT_FILE:
MSMg01no278_k12.g1 PHD_FILE: MSMg01no278_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:03 2005
(162 letters)
>mm_chr14_53167633_53168194
Length = 562
Score = 306 bits (158), Expect = 6e-88
Identities = 161/162 (99%)
Strand = Plus / Plus
Query: 1 ctcagggaccctattaaacgcatcatagttgcaaggtgaataattcatgtaagtaaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcagggaccctattaaacgcatcatagttgcaaggtgaataattcatgtaagtaaatta 260
Query: 61 gtgttatcagtgaatcctacatcacagaagagggagagaatcacaaagtctagtcatacc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgttatcagtgaatcctacatcagagaagagggagagaatcacaaagtctagtcatacc 320
Query: 121 caggagaacactgtttgtcagtcaaaagttaattctgggaga 162
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggagaacactgtttgtcagtcaaaagttaattctgggaga 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 562
Length adjustment: 8
Effective length of query: 154
Effective length of database: 554
Effective search space: 85316
Effective search space used: 85316
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
