Query= MSMg01no280_c06.b1 MSMg01no280_c06.b1 CHROMAT_FILE:
MSMg01no280_c06.b1 PHD_FILE: MSMg01no280_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:55 2005
(239 letters)
>mm_chr14_79901817_79902455
Length = 639
Score = 424 bits (219), Expect = e-123
Identities = 231/235 (98%)
Strand = Plus / Minus
Query: 1 acatgaagaggctgggggaggaaaaggaaaggagaaatgatgtaattactgacctttggc 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 acatgaaaaggctgggggaggaaaaggaaaggagaaatgatgtaattactgacctttggc 376
Query: 61 ctccacatgggcacacatgggcagcagcactcacatgcttactaatacgcatataccaca 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 375 ctccacatgggcacacatgggcagcagcactcacacgcttactaatacgcatataccaca 316
Query: 121 cacacacaaataatataggaatattcaaaaaagatgcttaacctaggcttcacttatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cacacacaaataatataggaatattcaaaaaagatgcttaacctaggcttcacttatgat 256
Query: 181 gtttcataatgctgttaatgtttcataaagggcagatacctcctccccgcttttg 235
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 255 gtttcataatgctgttaatgtttcataaagagcagatacctcctccccccttttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no280_c06.g1 MSMg01no280_c06.g1 CHROMAT_FILE:
MSMg01no280_c06.g1 PHD_FILE: MSMg01no280_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:55 2005
(239 letters)
>mm_chr14_79752230_79752868
Length = 639
Score = 344 bits (178), Expect = 2e-99
Identities = 218/240 (90%), Gaps = 18/240 (7%)
Strand = Plus / Plus
Query: 1 agtgtaaggctaccatgaacttatacagcaagagcctgtctcaaaaaaaaaaagtctaaa 60
|||||||||||||||||| ||||||||||||||||||||| ||| ||
Sbjct: 215 agtgtaaggctaccatgagcttatacagcaagagcctgtc--------------tcttaa 260
Query: 61 aatgttattatcttcagatttaaaagaccttagctctcctttatagaactatgtatgttt 120
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 261 aatg-tattatcttcagatttaaaagaccttagctctcctttatagaactatatatattt 319
Query: 121 ccca-tttctgatgactctaccttcac-aaaaatgttttttcatggtaaaggtttaccat 178
|||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 320 cccattttctgatgactctaccttcacaaaaaat-ttttttcatggtaaaggtttaccat 378
Query: 179 aaagaactactaaataaggctttgtaattctctataattctaagctgtacataaactgta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaagaactactaaataaggctttgtaattctctataattctaagctgtacataaactgta 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
