Query= MSMg01no280_e01.b1 MSMg01no280_e01.b1 CHROMAT_FILE:
MSMg01no280_e01.b1 PHD_FILE: MSMg01no280_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:03 2005
(384 letters)
>mm_chr14_64103392_64104177
Length = 786
Score = 630 bits (326), Expect = 0.0
Identities = 368/384 (95%), Gaps = 8/384 (2%)
Strand = Plus / Minus
Query: 4 ggaattctgtt---attacaaccatattgggcggctgcagctggcttctttttgctccac 60
||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ggaattctgttaagat--caatcatattgggcggctgcagctggcttctttttgctccac 527
Query: 61 tgtgttttctagat-c-cacctgcacagctgcgaagagccagagcctgcctgttctcagt 118
||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgtgttttcaag-tgcacacctgcacagctgcgaagagccagagcctgcctgttctcagt 468
Query: 119 gctgtagtgtgtcccagtgtttgtgtgatgaggcagtgtgctagaaagtctcctcttcag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gctgtagtgtgtcccagtgtttgtgtgatgaggcagtgtgctagaaagtctcctcttcag 408
Query: 179 taagatggacatttagatggttttcatgcctcttttcccgtgtctttggtgaatgccttc 238
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 407 taagatggacatttagatggttttcatgcctcttttcccctgtctttggtgaatgccttc 348
Query: 239 ggtttctcttggcatgacctaggtctgtgatctactgtgaggcagaccaggtttatttat 298
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 347 ggtttctcttggcatcacctaggtctgtgatctactgtgaggcagaccaggtttttttat 288
Query: 299 ctccagctcccgttgcctgttcctcccatgctgtgtgcacctactccatgtccccgacaa 358
|||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||
Sbjct: 287 ctccagctcccgttgcctgttcctcccatgctgtatacacctactccatgttcccgacaa 228
Query: 359 catttgattttgttggggctttta 382
||||||||||||||||||||||||
Sbjct: 227 catttgattttgttggggctttta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 786
Length adjustment: 9
Effective length of query: 375
Effective length of database: 777
Effective search space: 291375
Effective search space used: 291375
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_e01.g1 MSMg01no280_e01.g1 CHROMAT_FILE:
MSMg01no280_e01.g1 PHD_FILE: MSMg01no280_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:03 2005
(234 letters)
>mm_chr14_63956152_63956785
Length = 634
Score = 429 bits (222), Expect = e-125
Identities = 231/234 (98%)
Strand = Plus / Plus
Query: 1 gaaactcccaggaaagtagaaacaggaagattcaagtgcctgggcaggtttctaatgtcc 60
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 201 gaaactcccaggaaagtagaaacaggaagattgaagtacctgggcaggtttctaatgtcc 260
Query: 61 tggctactagaaaccctagaacagcaacggagaaaccatgggcagaggcggaaaccagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 tggctactagaaaccctagaacagcaacggagaaaccatgggcagaggcagaaaccagcc 320
Query: 121 aagaaataataaacatttctcacggctgagcagcatgtgtttctgtccagtacgatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaaataataaacatttctcacggctgagcagcatgtgtttctgtccagtacgatgaag 380
Query: 181 gagaaagacatactttacatgataccaacatggaagcccccaatgagaaggttg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagaaagacatactttacatgataccaacatggaagcccccaatgagaaggttg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
