CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATTTATGATAGCCTTTCTTATTTATTTATTGTTGCACTTTTAGAGT
TAAGTTTTCTAATCTTTCTGGAACCCATTTTGGCAGAGTCTGTATTTTCT
TCACAGAGATAGCTCATTGTCTCCGCAGGACTTATTGAATAATTCATACT
TTCTCTTTCATATGAAATGTCATATTTGTTAGATATTACACACACACACA
CATAAACATACAGGAGGTCATTGTTGGACTATCAAAATCTATTAGTGGAA
AAGATAGACTCTTGCCTTCACAAAACATTTTAAGAATTCTGGATTAAAAA
CATTATTAATCTCATAAGACATTTTCATAGTTCCCACATAAGTCCCATTC
CTGTGTCTACCTTTCCACTTTAATTTATTCTTCTCTTTCAAGTTATTTAT
ATGTGCTCACAGACTTGCTTTTCTATGTGAAATATAATTAAGAAATTCAA
AGTATTGCCAAACAAAAGTATCTATTGGAATGAATATATGTCTTCAAGCA
ATCACAAAAGTATCAAATCTCATTTCTGAATAAATTTTGAAATATATTAC
TAGATATGTTTTTCAAACAACATTAAACCACATTCATGATAAAGTTTATC
CAAAATATAGAATCATATCTTTTTTGGGGGGGTGGGGGATCATATTTTAT
CTTAGATGCCTCTTTAACTCTTGTATCAATATCCTATTCTTGCTGGGATG
GGATCCTACATTACCACN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGGGTTTGTACATGCTAGGAAAT
GACTGCACTACCTCTCTAACCTTGACCCGTTTGTGTGTTGTGCCTATTAT
CCCTCTGTCAGCTATGTAGATGAGAAATATTTCCTCCAATGCTCTAGGTT
GTCTCTTTATTCTCTTTATTGTTTCATTTGCTGTGAAGAGATTTTTAGTT
TGATGTAATCTTATTTGTCAAATTTTATTGTTTCCTATGCTGTGGTAAGT
TCTTTCCAAAAATTACTGCTCGTGCCAGTATATTGAAATGTTTTCCCAGA
AATTATGTTCTATAGTATATTTCTTAAGCTCCACCCGTTGATTAAAATGT
TCTGATCCATTTTAAGTTGATTTTTTATGCAAGGAGAGAGACAGTGATCA
AATTTCAGTCAGTTCTGTATAGATATTCATGGTTTCCAGCACCATTGTTA
AAGGGTCTTTCCTTGATCGAGTATAGATATGTTTGGGAAAGCTTGACTAA
CACTTACATTTCCCAGTGTGTTAAGATGTGTTTGGACAATGATCCCAAAT
GATCCTTTGAATTCATGTGGCATCAATTTTAACATCTCATTTTCAAGCTG
TCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCCCTCCCTCCCTCCCTTTTTCTCTTCTCTCTCTTTTTCACATTT
TCCATCTCTTTCGTATACCCNTN

Query= MSMg01no280_f07.b1 MSMg01no280_f07.b1 CHROMAT_FILE:
MSMg01no280_f07.b1 PHD_FILE: MSMg01no280_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:08 2005
         (643 letters)



>mm_chr14_40369658_40370702
          Length = 1045

 Score = 1166 bits (603), Expect = 0.0
 Identities = 631/641 (98%), Gaps = 2/641 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatttatgatagcctttcttatttatttattgttgcacttttagagttaagtttt 64
           |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gaattcatttatgaaaggttttcttatttatttattgttgcacttttagagttaagtttt 786

                                                                       
Query: 65  ctaatctttctggaacccattttggcagagtctgtattttcttcacagagatagctcatt 124
           |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ctaatctttctggaatttattttggcagagtctgtattttcttcacagagatagctcatt 726

                                                                       
Query: 125 gtctccgcaggacttattgaataattcatactttctctttcatatgaaatgtcatatttg 184
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gtctctgcaggacttattgaataattcatactttctctttcatatgaaatgtcatatttg 666

                                                                       
Query: 185 ttagatatt--acacacacacacacataaacatacaggaggtcattgttggactatcaaa 242
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ttagatattacacacacacacacacataaacatacaggaggtcattgttggactatcaaa 606

                                                                       
Query: 243 atctattagtggaaaagatagactcttgccttcacaaaacattttaagaattctggatta 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 605 atctattagtggaaaagatagactcttgccttcacaaaacattttaagaattctgaatta 546

                                                                       
Query: 303 aaaacattattaatctcataagacattttcatagttcccacataagtcccattcctgtgt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaaacattattaatctcataagacattttcatagttcccacataagtcccattcctgtgt 486

                                                                       
Query: 363 ctacctttccactttaatttattcttctctttcaagttatttatatgtgctcacagactt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctacctttccactttaatttattcttctctttcaagttatttatatgtgctcacagactt 426

                                                                       
Query: 423 gcttttctatgtgaaatataattaagaaattcaaagtattgccaaacaaaagtatctatt 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gcttttctatgtgaaatataattaagaaattcaaagtattgccaaacaaaagtatctatt 366

                                                                       
Query: 483 ggaatgaatatatgtcttcaagcaatcacaaaagtatcaaatctcatttctgaataaatt 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggaatgaatatatgtcttcaagcaatcacaaaagtatcaaatctcatttctgaataaatt 306

                                                                       
Query: 543 ttgaaatatattactagatatgtttttcaaacaacattaaaccacattcatgataaagtt 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttgaaatatattactagatatgtttttcaaacaacattaaaccacattcatgataaagtt 246

                                                    
Query: 603 tatccaaaatatagaatcatatcttttttgggggggtgggg 643
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tatccaaaatatagaatcatatcttttttgggggggtgggg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1045
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1035
Effective search space:   655155
Effective search space used:   655155
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)