Query= MSMg01no288_a12.b1 MSMg01no288_a12.b1 CHROMAT_FILE:
MSMg01no288_a12.b1 PHD_FILE: MSMg01no288_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:01 2005
(318 letters)
>mm_chr14_30305379_30306096
Length = 718
Score = 574 bits (297), Expect = e-168
Identities = 309/313 (98%)
Strand = Plus / Minus
Query: 5 gaattctcatggaggtctggtacgcaggaaggagcagacttgtgattcattgtagaacca 64
|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 517 gaattctcatggaggtctggtacgcaggaaggagtggacttgtgattcgttgtagaacca 458
Query: 65 aaagttgtctcaacacgttattgggtttcttgggtcatgttttcaggaccagagatcagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aaagttgtctcaacacgttattgggtttcttgggtcatgttttcaggaccagagatcagg 398
Query: 125 ggacacagaagcccaaacatgaaccacatgtgattttaagtactaccaatgacagcatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ggacacagaagcccaaacatgaaccacatgtgattttaagtactaccaatgacagcatga 338
Query: 185 gtgccaaagtgtatcagagtacacctctatgtatttctttacgtgctttgctgggttaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gtgccaaagtgtatcagagtacacctctatgtatttctttacgtgctttgctgggttaac 278
Query: 245 actacagggttgcattgtctcagcaaccaggaatgtgtggctcacaaaaccaaaaaagat 304
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 277 actacagggttgcattgtctcagcaaccaggaatgtgtggctcacaaagccaaaaaagat 218
Query: 305 ttcccggttgccc 317
|||||||||||||
Sbjct: 217 ttcccggttgccc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_a12.g1 MSMg01no288_a12.g1 CHROMAT_FILE:
MSMg01no288_a12.g1 PHD_FILE: MSMg01no288_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:01 2005
(289 letters)
>mm_chr14_30146364_30147052
Length = 689
Score = 516 bits (267), Expect = e-151
Identities = 284/295 (96%), Gaps = 9/295 (3%)
Strand = Plus / Plus
Query: 1 aatttccagtgagatgtcatcaaaaaccatcttctctctatggtgccaacagagacactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatttccagtgagatgtcatcaaaaaccatcttctctctatggtgccaacagagacactg 260
Query: 61 agcacccataatatctgctgttggcaagagggaaacaaagcaaaccaatggattcaggag 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 agcacccataatatctgctgttggcaagagggaaacaaagcaacccaatggattcaggag 320
Query: 121 aagcaggcagaggaataaaatgtaattattttcctgccatgatcttatatgtgcttctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcaggcagaggaataaaatgtaattattttcctgccatgatcttatatgtgcttctca 380
Query: 181 gtaaacagtccacaacctggagtgagctccaacagccatggtgaacttgtcacatttgaa 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 gtaaacagtccacaacctggagtgagcttcaacagccatggtgaacttgtcacatttgaa 440
Query: 241 gagattttaaga---------gaactattatgaacaacaacaataacagagacag 286
|||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 gagattttaagaaccgagatagaactattatgaacaacaacaataacagagacag 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
