Query= MSMg01no288_c19.b1 MSMg01no288_c19.b1 CHROMAT_FILE:
MSMg01no288_c19.b1 PHD_FILE: MSMg01no288_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:11 2005
(374 letters)
>mm_chr14_28746815_28747587
Length = 773
Score = 685 bits (354), Expect = 0.0
Identities = 369/374 (98%), Gaps = 1/374 (0%)
Strand = Plus / Minus
Query: 1 gctattggcacaggcacaggcatgccaaggactgcgcataagagtgacaaagctgcacat 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 573 gctattggcacaggcacaggcatgccaaggactgtgcataagagtgacaaagctgcacat 514
Query: 61 gggtgtggctcatagagacagtgaggccttcctgggggatatgttgacattgtgtgtaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 513 gggtgtggctcatagagacagtgaggccttcctgggggatatgttgacattgtgtgcaga 454
Query: 121 aaacatccaccatatctttctcccctgggatctttaaagcctgaagtctgctcccctaca 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aaacatccaccatacctttctcccctgggatctttaaagcctgaagtctgctcccctaca 394
Query: 181 gatattgctcctacaaagattagctaaccctgtctccttgactcagctgtataccataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gatattgctcctacaaagattagctaaccctgtctccttgactcagctgtataccataaa 334
Query: 241 ccttgcctccttaattcagctatatgcaatgacccaacacccatgcttaactgtgtatca 300
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 333 ccttgcctccttaattcagctatatgcaatga-ccaacacccatgattaactgtgtatca 275
Query: 301 taaacattctcgcttccagcatgctgcagcttctccaccagaaagcccagtctacccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 taaacattctcgcttccagcatgctgcagcttctccaccagaaagcccagtctacccaaa 215
Query: 361 gtcagtttttctgt 374
||||||||||||||
Sbjct: 214 gtcagtttttctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 773
Length adjustment: 9
Effective length of query: 365
Effective length of database: 764
Effective search space: 278860
Effective search space used: 278860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_c19.g1 MSMg01no288_c19.g1 CHROMAT_FILE:
MSMg01no288_c19.g1 PHD_FILE: MSMg01no288_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:12 2005
(289 letters)
>mm_chr14_28598037_28598725
Length = 689
Score = 509 bits (263), Expect = e-148
Identities = 286/301 (95%), Gaps = 12/301 (3%)
Strand = Plus / Plus
Query: 1 ccagcaggcatgcaaaggttgaggaaagactttggatgctgtggctttgctgacatcctg 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ccagcaggcatgcaaaagttgaggaaagactttggatgctgtggctttgctgacatcctg 248
Query: 61 cagccaaggtcctgaatatagaagaggaggtgattgggaagttctgcccaagggcacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cagccaaggtcctgaatatagaagaggaggtgattgggaagttctgcccaagggcacaga 308
Query: 121 gtatttctca------------tgtaattattttcatgcaaactttaaaacttgtggcca 168
|||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtatctctcatgattagtcacttgtaattattttcatgcaaactttaaaacttgtggcca 368
Query: 169 ccaagctttcagtaggcatgatcatgctatgaccttccttttctcatgtgctagaatgtc 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ccaagctttcagtaggcatgatcatgctatgaccttccttttctcatgtgctagaatgtc 428
Query: 229 atacttctcatttgtgtctcttgtctgagaaaacatttaattttgacggtagtatctctt 288
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atacttctcatttgtgtctctcgtctgagaaaacatttaattttgacggtagtatctctt 488
Query: 289 g 289
|
Sbjct: 489 g 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
