Query= MSMg01no288_g19.b1 MSMg01no288_g19.b1 CHROMAT_FILE:
MSMg01no288_g19.b1 PHD_FILE: MSMg01no288_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:30 2005
(345 letters)
>mm_chr14_80606520_80607265
Length = 746
Score = 607 bits (314), Expect = e-178
Identities = 338/346 (97%), Gaps = 1/346 (0%)
Strand = Plus / Plus
Query: 1 ctttgacaactttgcacatgcacattggtaatctgaccacctcctcatcttcaccctctc 60
|||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 201 ctttgacaactttgcacatgcacattggtaatctgattacttcctcatcttcaccctctc 260
Query: 61 atctccctgccatgcttatcaaccccggccccatccctacccgtgctttccccagattca 120
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 atctccctgccgtgcttatcaacccctgccccatccctacccgtgctttccccagattca 320
Query: 121 taact-ttttgttttgtcttgtggcccatttggtgtagccaggaccatctgggtgagcat 179
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taactcttttgttttgtcttgtggcccatttggtgtagccaggaccatctgggtgagcat 380
Query: 180 tgggttggaactgcccattggaacctggacatataatttgtgggtatacaatggacagca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggttggaactgcccattggaacctggacatataatttgtgggtatacaatggacagca 440
Query: 240 atgattctttcagtccctggatctatcagtcataaatagttcagcagtgggaggtaggtc 299
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 atgattctttcagtccctggatctatcagtcacaaatagttcagcagtgggaggtaggtc 500
Query: 300 cccctcagccatgcctccctccagccatgtctgattgttggctgaa 345
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 cccctcagccatgcctccctccagccgtgtctgattgttggctgaa 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 746
Length adjustment: 9
Effective length of query: 336
Effective length of database: 737
Effective search space: 247632
Effective search space used: 247632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_g19.g1 MSMg01no288_g19.g1 CHROMAT_FILE:
MSMg01no288_g19.g1 PHD_FILE: MSMg01no288_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:30 2005
(293 letters)
>mm_chr14_80765821_80766513
Length = 693
Score = 559 bits (289), Expect = e-164
Identities = 292/293 (99%)
Strand = Plus / Minus
Query: 1 tgtgaccagaagggcatggcaacatcttgggatataagtaataaaataactaattaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgtgaccagaagggcatggcaacatcttgggatataagtaataaaataactaattaataa 434
Query: 61 agtatagtagaatatttcaaaccatttaaactgaataccatcctctactcggttatcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agtatagtagaatatttcaaaccatttaaactgaataccatcctctactcggttatcttc 374
Query: 121 taaggttataaatggatattttatttgataattaaagacatggtgttttgagttttcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 taaggttataaatggatattttatttgataattaaagacatggtgttttgagttttcaaa 314
Query: 181 aagtttgtagtaagtgtctacaggtgactatgaagatatacatttcaaaatattacttag 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 313 aagtttgtagtaagtgtctacaggtaactatgaagatatacatttcaaaatattacttag 254
Query: 241 taattcacaatagaagtaaaagtaggaaataaagcatcggtaggtcatacacc 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 taattcacaatagaagtaaaagtaggaaataaagcatcggtaggtcatacacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
