Query= MSMg01no292_e22.b1 MSMg01no292_e22.b1 CHROMAT_FILE:
MSMg01no292_e22.b1 PHD_FILE: MSMg01no292_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:20 2005
(268 letters)
>mm_chr14_55374191_55374858
Length = 668
Score = 513 bits (265), Expect = e-150
Identities = 265/265 (100%)
Strand = Plus / Minus
Query: 4 ggaattcgccatgtagccctggctgacctcgaacttgaggcagtcctcctgcttcggcat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ggaattcgccatgtagccctggctgacctcgaacttgaggcagtcctcctgcttcggcat 488
Query: 64 ctctggtgctgcaatcagaacctcaacctctctgactagtaactttatcaaaaacctacc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctctggtgctgcaatcagaacctcaacctctctgactagtaactttatcaaaaacctacc 428
Query: 124 tctacgtcaaagggtctctcgaggtggcccatgttgaaaggatttgtgggtgctgtgctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tctacgtcaaagggtctctcgaggtggcccatgttgaaaggatttgtgggtgctgtgctc 368
Query: 184 ccaaggctggcacctttggagctggggaacttctgaaacaaagttttcttttcttttttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ccaaggctggcacctttggagctggggaacttctgaaacaaagttttcttttcttttttg 308
Query: 244 tttgttggtttggttttgtttggtt 268
|||||||||||||||||||||||||
Sbjct: 307 tttgttggtttggttttgtttggtt 283
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no292_e22.g1 MSMg01no292_e22.g1 CHROMAT_FILE:
MSMg01no292_e22.g1 PHD_FILE: MSMg01no292_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:20 2005
(294 letters)
>mm_chr14_55194472_55195170
Length = 699
Score = 549 bits (284), Expect = e-161
Identities = 291/296 (98%), Gaps = 5/296 (1%)
Strand = Plus / Plus
Query: 1 ctacgggtggagcaaggagcgggtgggggcgcggcacgccggagcttgcaggagcccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacgggtggagcaaggagcgggtgggggcgcggcacgccggagcttgcaggagcccagc 260
Query: 61 cgcgaggggggcgcgagaggatgctctcctggccccgcagcgcctcctcctccttccgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgcgaggggggcgcgagaggatgctctcctggccccgcagcgcctcctcctccttccgag 320
Query: 121 gcctcctactgcgacaggccgtcgtgccacgatgcttgagaaaaatgggactcccgagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctcctactgcgacaggccgtcgtgccacgatgcttgagaaaaatgggactcccgagaa 380
Query: 181 aaatcaagagtt-----tgtcagggatcatcagcctggttccattagaaacctggctgga 235
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatcaagagttgaatttgtcagggatcatcagcctggttccattagaaacctggctgga 440
Query: 236 ctgagcaagtgctctagggtccgcccttttccatattagaaaaatctggggtctcc 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgagcaagtgctctagggtccgcccttttccatattagaaaaatctggggtctcc 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 699
Length adjustment: 9
Effective length of query: 285
Effective length of database: 690
Effective search space: 196650
Effective search space used: 196650
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
