Query= MSMg01no293_g02.b1 MSMg01no293_g02.b1 CHROMAT_FILE:
MSMg01no293_g02.b1 PHD_FILE: MSMg01no293_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:46 2005
(320 letters)
>mm_chr14_108721930_108722649
Length = 720
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Plus
Query: 5 gaattcaatcacactctggcaaggagcaaacatatggttgggcacatcattgctggtgtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatcacactctggcaaggagcaaacatatggttgggcacatcattgctggtgtt 264
Query: 65 gttgctttcacaacacgtatagccagtgcttcttcatttccattagctttgtcacaataa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttgctttcacaacacgtatagccagtgcttcttcatttccattagctttgtcacaataa 324
Query: 125 gtatgaacaggtagttttgtaaatcatcttgaagaaaatataaccaatgccattccgtgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtatgaacaggtagttttgtaaatcatcttgaagaaaatataaccaatgccattccgtgg 384
Query: 185 acacacaagagaatttggatagacagctaggacaaagaattgacacattataataacata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acacacaagagaatttggatagacagctaggacaaagaattgacacattataataacata 444
Query: 245 gtgcagatcatgggagatgaggtacaagaaataaaagttagaagccatttggaatgttat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgcagatcatgggagatgaggtacaagaaataaaagttagaagccatttggaatgttat 504
Query: 305 cgatggatttgtat 318
||||||||||||||
Sbjct: 505 cgatggatttgtat 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_g02.g1 MSMg01no293_g02.g1 CHROMAT_FILE:
MSMg01no293_g02.g1 PHD_FILE: MSMg01no293_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:46 2005
(287 letters)
>mm_chr14_108776591_108777272
Length = 682
Score = 379 bits (196), Expect = e-109
Identities = 265/298 (88%), Gaps = 22/298 (7%)
Strand = Plus / Minus
Query: 1 cattgtgtagcttaaagtataaactatttaaatctgaccaggactggaattgactgcat- 59
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 575 cattgtgtagcttaaagtataaactatttaaatctgaccaggactggcattgact--ata 518
Query: 60 -ataagcgcatgaagggtgtgtgaga----------a-tcacctaatgttaaagcagtcc 107
|||||| |||||||||||||||||| | ||||||||| | |||||||| |
Sbjct: 517 cataagcacatgaagggtgtgtgagactgtggtcagagtcacctaatataaaagcagtac 458
Query: 108 actttccacatacttttccacacagatgaaattccattttaagataattccacctaagta 167
||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 457 acttttcacatacttttccatacagattaaattccattttaagataattccacctaagta 398
Query: 168 ttattaatgccaagggggatgtttgcttttttttaccatta-ataactccaatttcttgc 226
|||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 397 ttattaatgccaagggagatgtttgcttttt---accattacataactccaatttcttgc 341
Query: 227 ttctatttaacaaaatacaagaaacaacactagcaaataaaatgatatgtcatatgca 284
||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 340 ttctaattatcaaaatacaagaaacaacactagcaaataaaat---atgtcatatgca 286
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 682
Length adjustment: 9
Effective length of query: 278
Effective length of database: 673
Effective search space: 187094
Effective search space used: 187094
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
