Query= MSMg01no293_g19.b1 MSMg01no293_g19.b1 CHROMAT_FILE:
MSMg01no293_g19.b1 PHD_FILE: MSMg01no293_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:49 2005
(239 letters)
>mm_chr14_57688915_57689555
Length = 641
Score = 352 bits (182), Expect = e-101
Identities = 227/242 (93%), Gaps = 4/242 (1%)
Strand = Plus / Minus
Query: 1 caggaagtggggcctcccccaaccccaaccccaaagtcttagacgaccagatgttcgata 60
|||||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 441 caggaagtggggcctctcacaaccccaa-cccaaagtcttagatgaccagatgttcgata 383
Query: 61 aataattgagcttgttacaaacgtgctattaaagacatttatatccccaagtaacgagac 120
|||||||| ||| |||||| | |||||||||||||||||||||||||||| |||||| ||
Sbjct: 382 aataattgggctggttacatatgtgctattaaagacatttatatccccaactaacgaaac 323
Query: 121 a-t-tgccctgtcaattagtctaattgttaatgaacagtgctgtctacactacttttaaa 178
| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 322 actgtgccctgtcaattagtctagttgttaatgaacagtgctgtctacactacttttaaa 263
Query: 179 aaa-ctcaagcaggggaattttatatgttgtaaactttggtgcttaaagattcattaaat 237
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaaactcaagcaggggagttttatatgttgtaaactttggtgcttaaagattcattaaat 203
Query: 238 tc 239
||
Sbjct: 202 tc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 641
Length adjustment: 9
Effective length of query: 230
Effective length of database: 632
Effective search space: 145360
Effective search space used: 145360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no293_g19.g1 MSMg01no293_g19.g1 CHROMAT_FILE:
MSMg01no293_g19.g1 PHD_FILE: MSMg01no293_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:49 2005
(279 letters)
>mm_chr14_57530082_57530761
Length = 680
Score = 526 bits (272), Expect = e-154
Identities = 278/280 (99%), Gaps = 1/280 (0%)
Strand = Plus / Plus
Query: 1 atgttttaaaacagttagcaactttgaatctttgcagcccaagtctaagttggttataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgttttaaaacagttagcaactttgaatctttgcagcccaagtctaagttggttataga 260
Query: 61 tggggcttcgtatttggtatggtcaggtctgattgtcttaggtgcttgtagttattttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggcttcgtatttggtatggtcaggtctgattgtcttaggtgcttgtagttattttga 320
Query: 121 atgtcatttccaatggatcccttaaatttgaaaaaatgtaaatatttacactgttttata 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 atgtcatttccaatggatcccttaaatttggaaaaatgtaaatatttacactgttttata 380
Query: 181 tttttt-gtttttacagtgttagggagcaagtctagagcctcacctcacagaggcactct 239
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttttgtttttacagtgttagggagcaagtctagagcctcacctcacagaggcactct 440
Query: 240 actactaaattcattattaaatataagaatgtagcttaat 279
||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actactaaattcattattaaatataagaatgtagcttaat 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 680
Length adjustment: 9
Effective length of query: 270
Effective length of database: 671
Effective search space: 181170
Effective search space used: 181170
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
