Query= MSMg01no294_j20.b1 MSMg01no294_j20.b1 CHROMAT_FILE:
MSMg01no294_j20.b1 PHD_FILE: MSMg01no294_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:20 2005
(316 letters)
>mm_chr14_48031524_48032239
Length = 716
Score = 598 bits (309), Expect = e-175
Identities = 312/313 (99%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 5 gaattctgaaaatactaataaaaa-attaactgaggctttcttgcccggaaatcaggcct 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctgaaaatactaataaaaacattaactgaggctttcttgcccggaaatcaggcct 263
Query: 64 cgtgttgtgaggctggcctcaaactcccgtacttaagctatcaccctgcctcagcacatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgtgttgtgaggctggcctcaaactcccgtacttaagctatcaccctgcctcagcacatg 323
Query: 124 ggtagctgtgcagtcaggccctgggcaccacggtctagttatgtgctcggtgttatagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggtagctgtgcagtcaggccctgggcaccacggtctagttatgtgctcggtgttatagaa 383
Query: 184 caggcctaacgagcacagatcctggcctctctaattctcaacgctgctggaggaaaagaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caggcctaacgagcacagatcctggcctctctaattctcaacgctgctggaggaaaagaa 443
Query: 244 aaaaatcaatagcaaaaagccctcaatttacctttctcctagggacgagttttttcctgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaaaatcaatagcaaaaagccctcaatttacctttctcctagggacgagttttttcctgg 503
Query: 304 gcttcatccactt 316
|||||||||||||
Sbjct: 504 gcttcatccactt 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_j20.g1 MSMg01no294_j20.g1 CHROMAT_FILE:
MSMg01no294_j20.g1 PHD_FILE: MSMg01no294_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:20 2005
(196 letters)
>mm_chr14_48192369_48192964
Length = 596
Score = 379 bits (196), Expect = e-110
Identities = 196/196 (100%)
Strand = Plus / Minus
Query: 1 tgaccttagagaacaaaagatgaccgctgaaagtccttgctagagtagcacgctggggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tgaccttagagaacaaaagatgaccgctgaaagtccttgctagagtagcacgctggggac 337
Query: 61 cttctgctagaaggttgtaaggttgtgaggaacactcccttcccagaatgaccccggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cttctgctagaaggttgtaaggttgtgaggaacactcccttcccagaatgaccccggaaa 277
Query: 121 acaagctttacaaggaagcctccactgcaaggcaggtgcagctaaggaccaagaatgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 acaagctttacaaggaagcctccactgcaaggcaggtgcagctaaggaccaagaatgttt 217
Query: 181 cagttccctcttctgt 196
||||||||||||||||
Sbjct: 216 cagttccctcttctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space: 110544
Effective search space used: 110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
