Query= MSMg01no295_b15.b1 MSMg01no295_b15.b1 CHROMAT_FILE:
MSMg01no295_b15.b1 PHD_FILE: MSMg01no295_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:56 2005
(654 letters)
>mm_chr14_55175616_55176670
Length = 1055
Score = 1220 bits (631), Expect = 0.0
Identities = 646/651 (99%), Gaps = 1/651 (0%)
Strand = Plus / Plus
Query: 5 gaattcattaggtgagctctctttgagacaagagagttaatgctctctagtacagagagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattaggtgagctctctttgagacaagagagttaatgctctctagtacagagagt 264
Query: 65 gtaggtcattctagcaaccagaaatgcagcagaggtacatgactttaatcccagcactct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtaggtcattctagcaaccagaaatgcagcagaggtacatgactttaatcccagcactct 324
Query: 125 ggagacaagcaaacctctgtgatttcaagactagagtagtctacatagtgagttccagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggagacaagcaaacctctgtgatttcaagactagagtagtctacatagtgagttccagga 384
Query: 185 cagccaaagctatgtagagagaccctgtctcaacgaaaacataagaaaatatggcaaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagccaaagctatgtagagagaccctgtctcaacgaaaacataagaaaatatggcaaagg 444
Query: 245 attgcaaaaagaatgttcaaatcagagcacccaccgtcctgagccagagctgcaccccac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attgcaaaaagaatgttcaaatcagagcacccaccgtcctgagccagagctgcaccccac 504
Query: 305 caaactccttttcctcaggttactttgcaaagaaaaaaaaaaaaa-cagcctcattgggg 363
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 505 caaactccttttcctcaggttactttgtaaagaaaaaaaaaaaaaacagcctcattgggg 564
Query: 364 tgttttagcacaccatgttcaaagggttttgctgtaactgtgcattaccacaagtcagct 423
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgttttagcataaaatgttcaaagggttttgctgtaactgtgcattaccacaagtcagct 624
Query: 424 agtgagcaccctccaaaattactcaccgtccaaagttgcagccacccccaccgctcccag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtgagcaccctccaaaattactcaccgtccaaagttgcagccacccccaccgctcccag 684
Query: 484 aattcaggaggctgaaatacaaaggatcccaaactggaggacagcctgggcagctccatg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aattcaggaggctgaaatacaaaggatcccaaactggaggacagcctgggcagctccatg 744
Query: 544 taactctgtctcgaaagcaaacagaaaagaaactggggcattgccaagtgagagcgagct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 taactctgtctcgaaagcaaacagaaaagaaactggggcattgccaagtgagagcgagct 804
Query: 604 tacgacggaagtctagcatcctgaactcagtctcaagtatcataaatacat 654
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tacgacggaagtctagcatcctgaactcagtctcaagtatcataaatacat 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_b15.g1 MSMg01no295_b15.g1 CHROMAT_FILE:
MSMg01no295_b15.g1 PHD_FILE: MSMg01no295_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:56 2005
(287 letters)
>mm_chr14_55249303_55249989
Length = 687
Score = 555 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Minus
Query: 1 agggcaggagcccctgtgaaggcatgagaccaagaagagggaaagaggaggctccacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 agggcaggagcccctgtgaaggcatgagaccaagaagagggaaagaggaggctccacagc 428
Query: 61 agctgtaacggcagcaacacaaatggggttggtagagggctaaagacagccagccgggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agctgtaacggcagcaacacaaatggggttggtagagggctaaagacagccagccgggcc 368
Query: 121 tgggtgtggagcactaataaagggtggctgtggtagaatcagtgctatcagccaggacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgggtgtggagcactaataaagggtggctgtggtagaatcagtgctatcagccaggacct 308
Query: 181 gccacttcctcttttatacacacactccccggcacacagggtgtcttcatggagcacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gccacttcctcttttatacacacactccccggcacacagggtgtcttcatggagcacaga 248
Query: 241 agagtcaggatgtcaagggtgaaggggtggaatacatcaggtacggt 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agagtcaggatgtcaagggtgaaggggtggaatacatcaggtacggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
