Query= MSMg01no297_a23.b1 MSMg01no297_a23.b1 CHROMAT_FILE:
MSMg01no297_a23.b1 PHD_FILE: MSMg01no297_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:24 2005
(541 letters)
>mm_chr14_14451446_14452386
Length = 941
Score = 990 bits (512), Expect = 0.0
Identities = 531/542 (97%), Gaps = 8/542 (1%)
Strand = Plus / Minus
Query: 5 atcaccactgggtcccggggttcaatatctcagcttgactggagaccagattttctgtgt 64
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 941 atcaccactgggtcccggggttcaatatctcagcttgattggagaccagattttctgtgt 882
Query: 65 atagcccaatgcccaacatgtgctaggctaggctggctggccccagagtctccaaaattg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 atagcccaatgcccaacatgtgctaggctaggctggctggccccagagtctccaaaattg 822
Query: 125 gccatttctacctctacagtgctatgagtgagtgctatgagtaagtgctatgagtgcatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gccatttctacctctacagtgctatgagtgagtgctatgagtaagtgctatgagtgcatg 762
Query: 185 tgattatgagtatgt--------actccacttgttatgtgcattctgggacttgaaccct 236
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 761 tgattatgagtatgtactaacacactccacttgttatgtgcattctgggacttgaaccct 702
Query: 237 ggtccatatgactgatgtacaccccagcctcacttcctattattgatggaagattccaga 296
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ggtccatatgactgaggtacaccccagcctcacttcctattattgatggaagattccaga 642
Query: 297 gcaatactgctctgagattgtgacagggctgatatccccctgccttcatcagcggcacca 356
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 641 gcaatactgctctgagattgtgacagggctgatatccccctgccttcatcagcagcacca 582
Query: 357 cagatccacccatctattgttgtggcttctttgttttactgctcttcccttgttttattc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 cagatccacccatctattgttgtggcttctttgttttactgctcttcccttgttttattc 522
Query: 417 tcccatctgtcaccctggtcagcttcctagcatcccagccaagcaagctgcttttgtccc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tcccatctgtcaccctggtcagcttcctagcatcccagccaagcaagctgcttttgtccc 462
Query: 477 aagctccagagcctgacttcagagacccccacatttggacattgcatactgtgtgccagg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aagctccagagcctgacttcagagacccccacatttggacattgcatactgtgtgccagg 402
Query: 537 ag 538
||
Sbjct: 401 ag 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_a23.g1 MSMg01no297_a23.g1 CHROMAT_FILE:
MSMg01no297_a23.g1 PHD_FILE: MSMg01no297_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:25 2005
(674 letters)
>mm_chr14_14404178_14405251
Length = 1074
Score = 1278 bits (661), Expect = 0.0
Identities = 670/673 (99%)
Strand = Plus / Plus
Query: 1 attctcaaggtcccaactttctgtgccagaacatcagtacaatcatctgccacctatgtg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctcaaggtcccaactttctttgccagaacatcagtacaatcatctgccacctatgtg 260
Query: 61 acttcaataggatttagaaccactccatgtttccatttgatacctgggaaatagatacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttcaataggatttagaaccactccatgtttccatttgatacctgggaaatagatacag 320
Query: 121 cacatgaggccattggtcaggttacctgagttattacacataaagacactacagcaatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacatgaggccattggtcaggttacctgagttattacacataaagacactacagcaatgg 380
Query: 181 caggcatccagcaggggcttattaaagtaagatgtcatttccatcaagcttatattatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggcatccagcaggggcttattaaagtaagatgtcatttccatcaagcttatattatac 440
Query: 241 accctgtcattcattgtgtgctttccatgtagctggtgtttaagtcttactggatgggcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accctgtcattcattgtgtgctttccatgtagctggtgtttaagtcttactggatgggcc 500
Query: 301 aactgaaaagccgtgaataggtgagcagtatttactttcttatctagagaattgcagtga 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactgaaaagcagtgaataggtgagcagtatttactttcttatctagagaattgcagtga 560
Query: 361 atttcttactgtgctgcaatgatcaaatatctttcatattatttttcattctttgagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttcttactgtgctgcaatgatcaaatatctttcatattatttttcattctttgagcct 620
Query: 421 gtgaactcagcttaagctgttgtcactacagatgaatgcagtcaggcttaataatataga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgaactcagcttaagctgttgtcactacagatgaatgcagtcaggcttaataatataga 680
Query: 481 gtttcactctgtcttccatttcttggttacctttctttatgttccccctataattatggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 gtttcactctgtcttccatttcttggttacctttctttatgttccccctataattgtggt 740
Query: 541 acttatttttattatttaaggataaagaacagaacacagctccatacacctaagtaggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acttatttttattatttaaggataaagaacagaacacagctccatacacctaagtaggag 800
Query: 601 cttgaatactactacagctagcaaatctgaaaacagtgatgtatgaggaaggcaataggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttgaatactactacagctagcaaatctgaaaacagtgatgtatgaggaaggcaataggg 860
Query: 661 tagcaagaaaaag 673
|||||||||||||
Sbjct: 861 tagcaagaaaaag 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
