Query= MSMg01no297_b20.b1 MSMg01no297_b20.b1 CHROMAT_FILE:
MSMg01no297_b20.b1 PHD_FILE: MSMg01no297_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:29 2005
(695 letters)
>mm_chr14_56907197_56908290
Length = 1094
Score = 1230 bits (636), Expect = 0.0
Identities = 657/664 (98%), Gaps = 1/664 (0%)
Strand = Plus / Minus
Query: 1 gaattcataattattttacctaaaaaaggttcctttctctgaaatcgaagaatgctctag 60
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gaattcataattattttagttaaaaaaggttcctttctctgaaatcgaagaatgctctag 604
Query: 61 tcacattccaccaggaacaatgactgttatgctaatgacatcctctcagttccagctgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tcacattccaccaggaacaatgactgttatgctaatgacatcctctcagttccagctgtc 544
Query: 121 cggtggtctctggatgaatgagctgctactgaacattctgtagaggaagtgacaactttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cggtggtctctggatgaatgagctgctactgaacattctgtagaggaagtgacaactttt 484
Query: 181 gaaaaatgtgacaagaaggtgaatctacaagatgcttcctcagagcaccagcagcgactt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 483 gaaaaatgtgacaagaaggtgaatctacaagatgcttcctcagagcgccagcagcgactt 424
Query: 241 catggccagaaatgtgggctgtaaataaggcctttggatagaaatagaaagagagtggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 catggccagaaatgtgggctgtaaataaggcctttggatagaaatagaaagagagtggga 364
Query: 301 gcagtcagaagggaaaagaaagggtagggataagctcttgatgtgatctctctgacgtag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gcagtcagaagggaaaagaaagggtagggataagctcttgatgtgatctctctgacgtag 304
Query: 361 atgatctctctttccacagatgtaataatgatcaatctcaaatttggacaaaaaagaaag 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 303 atgatctctctttccacagatgtaataatgatcaatctcaaatttggacaaaaaagtaag 244
Query: 421 agagaaaaggccccatttaaaaagaaaaaagtctttcctgaagtactgggaacatagctt 480
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 243 agagaaaaggccccatttaaaaag-aaaaagtctttcctgaagtgctgggaacatagctt 185
Query: 481 tgtggtagagtgtgtgactagctagcatgtataaggtcccgggttccctccccattactg 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tgtggaagagtgtgtgactagctagcatgtataaggtcccgggttccctccccattactg 125
Query: 541 aagacagactgtgttctggaaatctcactcactgacttggattggatagaaatgggtcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aagacagactgtgttctggaaatctcactcactgacttggattggatagaaatgggtcaa 65
Query: 601 catgtcacatataaggtgtcatatacaagggagcctgggagggtgagtatgttgtttcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 catgtcacatataaggtgtcatatacaagggagcctgggagggtgagtatgttgtttcta 5
Query: 661 gcta 664
||||
Sbjct: 4 gcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1094
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1084
Effective search space: 742540
Effective search space used: 742540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_b20.g1 MSMg01no297_b20.g1 CHROMAT_FILE:
MSMg01no297_b20.g1 PHD_FILE: MSMg01no297_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:29 2005
(645 letters)
>mm_chr14_56742414_56743460
Length = 1047
Score = 1193 bits (617), Expect = 0.0
Identities = 639/647 (98%), Gaps = 2/647 (0%)
Strand = Plus / Plus
Query: 1 cctggagcattggagcagtgctgagcatggaaatcttggcttctttttcttactcagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctggagcattggagcagtgctgagcatggaaatcttggcttctttttcttactcagctc 260
Query: 61 atcaaacccagcatcatagctactgaggccaaaccacgcgaaggcatttaactagtaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaaacccagcatcatagctactgaggccaaaccacgcgaaggcatttaactagtaagg 320
Query: 121 agtgaacatgaccaaggatgttacagtaacaaagcaaggaaagaaatggcacagtgaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgaacatgaccaaggatgttacagtaacaaagcaaggaaagaaatggcacagtgaaaa 380
Query: 181 tgtcaaaaacaccacggaattggaaggatggactcgaagtagagattggtgggacttcct 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 tgtcaaaaacaccacggaattggaaggatggactcgaggtagagattggtgggacttcct 440
Query: 241 ggagggggcagtagctgactttaaaggatttcaatgtttggggaaagcaaactaattctg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 ggagggggcagtagctgactttaaaggatttcaatgtttggggaaagcaaaccaattctg 500
Query: 301 ctgaattgagggacgtcagacactttcggtcgtctgtcctggaggcgacattttgccaac 360
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 501 ctgaattgagggacgtcagacactttcggttgtctgtcctggaggtgacattttgccaac 560
Query: 361 tgcaagtgacaaagaaaaggcatttgctgccaacttcccaaattgcacaggccatgtcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcaagtgacaaagaaaaggcatttgctgccaacttcccaaattgcacaggccatgtcct 620
Query: 421 gggataagggttcgggggaagggtagctctgaggtcgtctgtgtaaaagtgaccaattta 480
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 gggataagggttggggggaagggtagctctgaggtcgtctgtgtaaaagtgaacaattta 680
Query: 481 cagttatggctatacttgagtcaattaaaatgttttattagtagggatttgaatccttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagttatggctatacttgagtcaattaaaatgttttattagtagggatttgaatccttta 740
Query: 541 cattcattaacatttaacagtaaatggggggg--tggtaaataaatattctctggctttt 598
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 741 cattcattaacatttaacagtaaatgggggggggtggtaaataaatattctctggctttt 800
Query: 599 taaaggtcaaaaataattttaaattaaaaataatttttgttacaata 645
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 taaaggtcaaaaataattttaaattaaaaataatttttgttacaata 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1047
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1037
Effective search space: 658495
Effective search space used: 658495
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
