Query= MSMg01no297_f21.b1 MSMg01no297_f21.b1 CHROMAT_FILE:
MSMg01no297_f21.b1 PHD_FILE: MSMg01no297_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:48 2005
(596 letters)
>mm_chr14_118084992_118085990
Length = 999
Score = 1050 bits (543), Expect = 0.0
Identities = 580/595 (97%), Gaps = 7/595 (1%)
Strand = Plus / Plus
Query: 3 gaattcaaaggattttc---ctcaaacccagtgggtacccaaatgttgctgagttcatca 59
||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcagaggatt--catactcaaacccagtgggtacccaaatgttgctgagttcatca 260
Query: 60 gtggtgcctcttctgtgaggcacctgcggcttgttccatataacaccaaacaaaagcaaa 119
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 gtggcgcctcttctgtgaggcacctgcggcttgttccatacaacaccaaacaaaagcaaa 320
Query: 120 ggcagaagccgagctagttttgttggggtgggtgaagggaattgttgttgctcattcttt 179
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ggcagaagccgagctagttttgttggggtgagtgaagggaattgttgttgctcattcttt 380
Query: 180 gttttattttgtctggagtttggttctctgtctcgttcagggtgctgtgcttggggaagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttttattttgtctggagtttggttctctgtctcgttcagggtgctgtgcttggggaagc 440
Query: 240 atggtctattatcctactctataaacagagttaaaatggagtaacagccaatgaacgtca 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggtctattttcctactctataaacagagttaaaatggagtaacagccaatgaacgtca 500
Query: 300 gtgtagcagcctgtgggtttttaccatgtctacacctgtgtatactgatggaccctggag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgtagcagcctgtgggtttttaccatgtctacacctgtgtatactgatggaccctggag 560
Query: 360 gttcaaggggttccagctgaaataaacagag--tctgaaagactctgagaatgtttatat 417
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 gttcaaggggttccagctgaaataaacagagagtctgaaagactctgagaatgtttatat 620
Query: 418 tcactagtcttaaatggttttagttacatgtgagtaatcactactctgacacagttctac 477
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 tcactagtcttaaatggttttagttacatgtgagtaaccactactctgacacagttctac 680
Query: 478 aatttcaaatcaatccatagaatattctaaaatcgtagcaaaggatattctttccattca 537
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 681 aatttcaaatcaatccatagaatactctaaaattgtagcaaaggatattctttccattca 740
Query: 538 tttttttggtaacaaagcaggcaaccagtctgtagatttctggagggaaccatag 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttttttggtaacaaagcaggcaaccagtctgtagatttctggagggaaccatag 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 999
Length adjustment: 10
Effective length of query: 586
Effective length of database: 989
Effective search space: 579554
Effective search space used: 579554
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_f21.g1 MSMg01no297_f21.g1 CHROMAT_FILE:
MSMg01no297_f21.g1 PHD_FILE: MSMg01no297_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:48 2005
(574 letters)
>mm_chr14_118227197_118228170
Length = 974
Score = 1048 bits (542), Expect = 0.0
Identities = 566/574 (98%)
Strand = Plus / Minus
Query: 1 caggtggaagccgaggaaagtggatccaacaggctccaacagccttctgctctgggggcc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 caggtggaggccgaggaaagtggatccaacaggctccaacagccttctgctctgggggcc 715
Query: 61 aataataggctgtccatgtgcaagtgtgtttctactttggggttttgagtcaaaataatt 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 agtaataggctgtccatgtgcaagtgtgtttctactttggggttttgagtcaaaataatt 655
Query: 121 tataaacccatctctctctttctgtctctctttccaggcctgaaatgctcgcgggcacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tataaacccatctctctctttctgtctctctttccaggcctgaaatgctcgcgggcacgt 595
Query: 181 cagcagctgtatggaaattgtcctggtgccagcagggtcctttctcaaggtcactttgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 cagcagctgtatggaaattgtcctggtgccagcagggtcctttctcaaggtcactttgtg 535
Query: 241 taatattgaataattggctttacatgtacatgataagaatgagaggaaattatttttcca 300
|||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 534 taatattggagaattggctttacatgtgcatgataagaatgagaggaaattatttttcca 475
Query: 301 ttgaccacattatgcagagttacaaaaaaatgaacaaacttatgatgtaaagacatgggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttgaccacattatgcagagttacaaaaaaatgaacaaacttatgatgtaaagacatgggt 415
Query: 361 ttctataatgttggttactgtaaatttttatatcacctcatctccaattcaaatgtcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttctataatgttggttactgtaaatttttatatcacctcatctccaattcaaatgtcaag 355
Query: 421 tcagggtaaagttcctgcgcagttttaaaatcctgccctcccccaatcattacaacaaat 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 354 tcagggtaaagttcctgcgcagttttaaaatcctgcccccccccaatcattacaacaaat 295
Query: 481 tttgaggcattcataaaaatgcagacatagccggcagagtgtgaggtgaggacagagaaa 540
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 294 tttgaggcattcataaaaatgcagacatagccggcagaatgggaggtgaggacagagaaa 235
Query: 541 ccagtgttagtggcaaactgggcagggaactggc 574
||||||||||||||||||||||||||||||||||
Sbjct: 234 ccagtgttagtggcaaactgggcagggaactggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
