Query= MSMg01no297_i03.b1 MSMg01no297_i03.b1 CHROMAT_FILE:
MSMg01no297_i03.b1 PHD_FILE: MSMg01no297_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:58 2005
(492 letters)
>mm_chr14_104099833_104100729
Length = 897
Score = 806 bits (417), Expect = 0.0
Identities = 475/497 (95%), Gaps = 5/497 (1%)
Strand = Plus / Plus
Query: 1 aattcacttctcctattagctgaggggctcagtatgtactcaacctagtaggttcacatt 60
||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 aattcacttctcctaacagttgaggggctcagtatgtactcaacttagtaggttcacatt 260
Query: 61 atcaacaaagcaggttgaagaatgttcctaaaattgcagctgagacaatgcagtcttcca 120
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 accaacaaagcaggttgaagaatgttcctaaaattgcaactgagacaatgcagtcttcca 320
Query: 121 ttgtcatgagaacagaccaccatgtgctgggacaccacatagtaacaccat-----gtag 175
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 321 ttgtcatgagaacagaccaccatgtgctggaacaccacatagtaacaccatagcacgtag 380
Query: 176 ggctctcatgcacctaatattgggtaaaagaagctccacacgaaaaggaacatgggatgg 235
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 ggctctcatgcacctaatatcgggtaaaaggagctccacacgaaaaggaacatgggatgg 440
Query: 236 gattccagtgtagggatggtcggcgtgcagtgacagaagatgaaacgtgttctctcggga 295
||||||||||||||||||| | |||||||||||||||||| |||| ||||||||||||||
Sbjct: 441 gattccagtgtagggatgggcagcgtgcagtgacagaagaggaaatgtgttctctcggga 500
Query: 296 gatgttctccctggggtggagtatgggagtctctgagaagctcgtgacactgtccttctt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgttctccctggggtggagtatgggagtctctgagaagctcgtgacactgtccttctt 560
Query: 356 gagatgggggatcatgagcatgttcactgaagaaggtcaccagcatgtgtacttcaggct 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagatgggggatcatgagcatgttcactgaagaaggtcaccagcatgtgtacttcaggct 620
Query: 416 gattatagatagtgcttcggagaagttgagccagattcacatactgcactgtgttaatta 475
|||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||
Sbjct: 621 gattatagatagtgtttctgagaagatgagccagattcacttactgcactgtgttaatta 680
Query: 476 acagatttcttttaatt 492
|||||||||||||||||
Sbjct: 681 acagatttcttttaatt 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 897
Length adjustment: 10
Effective length of query: 482
Effective length of database: 887
Effective search space: 427534
Effective search space used: 427534
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_i03.g1 MSMg01no297_i03.g1 CHROMAT_FILE:
MSMg01no297_i03.g1 PHD_FILE: MSMg01no297_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:58 2005
(244 letters)
>mm_chr14_104274598_104275241
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 1 tggaaaagagaaaaacctgtttaggtatctggtttggtctggagtctctgcatatctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tggaaaagagaaaaacctgtttaggtatctggtttggtctggagtctctgcatatctttg 385
Query: 61 acccacaatcctcatgtcttcttctcatgtgtaaaggcttttcagccctcctctttagaa 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acccacaatcctcgtgtcttcttctcatgtgtaaaggcttttcagccctcctctttagaa 325
Query: 121 gcagtgcttggagtggggacactctggcttcttgacactcttgggtctatccctaccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcagtgcttggagtggggacactctggcttcttgacactcttgggtctatccctaccatg 265
Query: 181 ccttccactttcttccaccttttttctgatgatgtgacccacctagagagttacctttgg 240
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccgtccactttcttccaccttttctctgatgatgtgacccacctagagagttacctttgg 205
Query: 241 gtta 244
||||
Sbjct: 204 gtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
