Query= MSMg01no297_l03.b1 MSMg01no297_l03.b1 CHROMAT_FILE:
MSMg01no297_l03.b1 PHD_FILE: MSMg01no297_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:11 2005
(698 letters)
>mm_chr14_118766135_118767232
Length = 1098
Score = 1118 bits (578), Expect = 0.0
Identities = 611/624 (97%), Gaps = 4/624 (0%)
Strand = Plus / Minus
Query: 4 ggaattcatcaaggcattcacaatggattagagcaaggggaggcagggataggctagtcc 63
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 624 ggaattcatcaaggcattcagaatggatgagagcaaggggaggcagggataggctagtcc 565
Query: 64 tacacagaaaagtccccaggataccaggagagaaggcgctaagaaggggggaaatcacca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 564 tacacagaaaagtccccaggataccaggagagaaggcgctaagaaggggggaaatcagca 505
Query: 124 ttcaaagtaaagcagaatagagtccagagggacatctgggtgtctgatggctacacacag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttcaaagtaaagcagaatagagtccagagggacatctgggtgtctgatggctacacacag 445
Query: 184 ctctgctagactcaccgcctttgtgagtcttgcctccttgcatgtggtttccatacccca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctctgctagactcaccgcctttgtgagtcttgcctccttgcatgtggtttccatacccca 385
Query: 244 ggcttgcgtgcagccctagaatggcaaggggagaagtgaggctgtgttgacctgtgatga 303
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggctagcgtgcagccctagaatggcaaggggagaagtgaggctgtgttgacctgtgatga 325
Query: 304 caaaatgctgattgtctggaactgaaactttagagtttcacatttgttctacctgccaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caaaatgctgattgtctggaactgaaactttagagtttcacatttgttctacctgccaga 265
Query: 364 gcttttgcatccaataccattttatgagagagtccgagaggggaaagcagcacacataca 423
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcttttgcatccaatagcattttatgagagagtccgagaggggaaagcagcacacataca 205
Query: 424 cgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgtg----cgtgtgcgtgtgcg 479
|||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||
Sbjct: 204 cgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgtgcgtgtgcg 145
Query: 480 tgcgcatgcacatgcacaaagaatatttcctcacaaaacaaaaacagtattttcagaatt 539
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 144 tgcgcatgcacatgcacaaagaaaatttcctcacaaaacaaaaacagtattttcagaatt 85
Query: 540 tactctgctttcagactatttccatcaagcttcttattcattttgacttatttccatcta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tactctgctttcagactatttccatcaagcttcttattcattttgacttatttccatcta 25
Query: 600 taagcagactaacgcttctctctg 623
||||||||||||||||||| ||||
Sbjct: 24 taagcagactaacgcttctttctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space: 748544
Effective search space used: 748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_l03.g1 MSMg01no297_l03.g1 CHROMAT_FILE:
MSMg01no297_l03.g1 PHD_FILE: MSMg01no297_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:12 2005
(168 letters)
>mm_chr14_118608037_118608603
Length = 567
Score = 294 bits (152), Expect = 2e-84
Identities = 161/164 (98%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 1 cttgctatagcatgtccagggaagtccagaaccattgatttaagtggttttgggaaaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 cttgctatagcatgtccagggaagtccagaaccattgatttaagtggttttggg-aaaaa 259
Query: 61 aaatcagaacttgagttgtctacccaggtcaaatgtaagaaatgcatcataaatatgagg 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 260 aaatcagaacttgagttgtctacccaggtctaatgtaagaaatgcatcataaatatgagg 319
Query: 121 gaccaggagaggaaaaggtaggagtggggggaggtggggaggta 164
|||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 320 gaccaggagaggaaaaggtaggagaggggggaggtggggaggta 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 567
Length adjustment: 8
Effective length of query: 160
Effective length of database: 559
Effective search space: 89440
Effective search space used: 89440
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
