Query= MSMg01no298_g13.b1 MSMg01no298_g13.b1 CHROMAT_FILE:
MSMg01no298_g13.b1 PHD_FILE: MSMg01no298_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:05 2005
(671 letters)
>mm_chr14_93878351_93879421
Length = 1071
Score = 1259 bits (651), Expect = 0.0
Identities = 663/669 (99%), Gaps = 5/669 (0%)
Strand = Plus / Minus
Query: 6 gaattctctcatttc---gttggcatgtcattttttgatattattttatctgttttggca 62
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 gaattctctca--tcaatgttggcatgtcattttttgatattattttatctgttttggca 830
Query: 63 ctttggatgcttcagtataattgccttgataaatagaactgagctgctggtagcttcctt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 ctttggatgcttcagtataattgccttgataaatagaactgagctgctggtagcttcctt 770
Query: 123 gtctcttcctccacttttctgctgatattttgaagcattgtcttcttataataacattta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gtctcttcctccacttttctgctgatattttgaagcattgtcttcttataataacattta 710
Query: 183 ttattttagaacagaattttttaaagcagagctggggcctatttaagaagagtttgttac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ttattttagaacagaattttttaaagcagagctggggcctatttaagaagagtttgttac 650
Query: 243 aggttttgagcacaagggttcaaatcagattttataggaaaaaaataagacatagagcat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aggttttgagcacaagggttcaaatcagattttataggaaaaaaataagacatagagcat 590
Query: 303 gggtttggacatcttagatgggtcaacctgattttatttaaataatttcttagatttcag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gggtttggacatcttagatgggtcaacctgattttatttaaataatttcttagatttcag 530
Query: 363 gctggttttgcaacaccattttgagatattgtatgtggtaaagtacttaccttgctgtct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gctggttttgcaacaccattttgagatattgtatgtggtaaagtacttaccttgctgtct 470
Query: 423 ttctaagaacaattaaaggataatttgtaatgtgggagatcccagggaacagaattctct 482
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttctaagaacaattaaaagataatttgtaatgtgggagatcccagggaacagaattctct 410
Query: 483 attcttttcaagtggaaagggggaagattgccagcactataaatgaaactaccagataat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 attcttttcaagtggaaagggggaagattgccagcactataaatgaaactaccagataat 350
Query: 543 tttcccattaatcattcacaagtatctatatttcagagtttatatggcaattaagagata 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tttcccattaatcattcacaagtatctatatttcagagtttatatggcaattaagagata 290
Query: 603 accttcctactggtcctttccactacaaagtccatgatcatgacctctttttgtatttat 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 accttcctactggtcctttccactacaaagtccatgatcatgacctctttttgtatttat 230
Query: 663 ttaaatgtc 671
|||||||||
Sbjct: 229 ttaaatgtc 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_g13.g1 MSMg01no298_g13.g1 CHROMAT_FILE:
MSMg01no298_g13.g1 PHD_FILE: MSMg01no298_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:05 2005
(642 letters)
>mm_chr14_93725045_93726086
Length = 1042
Score = 1210 bits (626), Expect = 0.0
Identities = 638/642 (99%)
Strand = Plus / Plus
Query: 1 tctgtactgctttaaagggaatatttgaggctaacaatttccaaggttggatgtggctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtactgctttaaagggaatatttgaggctaacaatttccaaggttggatgtggctct 260
Query: 61 ttggatgatgtagggtgtaggccagatacgttcctttcaacctacttatgcaaaactcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggatgatgtagggtgtaggccagatacgttcctttcaacctacttatgcaaaactcaa 320
Query: 121 ttattcaaaacataaaacatgaataaaaatttatgaaagaattatctcctttttttctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttattcaaaacataaaacatgaataaaaatttatgaaagaattatctcctttttttctca 380
Query: 181 gacagattcacatcacattcaatagtctttattctgtgtaaagagttctttagacgatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagattcacatcacattcaatagtctttattctgtgtaaagagttctttagacgatag 440
Query: 241 cacgccaattgtcttagacaaatatatgtatgcacagacacacaaaaacatatttctatt 300
|||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacgccaaagggcatagacaaatatatgtatgcacagacacacaaaaacatatttctatt 500
Query: 301 tctattagatatcatccacaatattctaataaactgtattttatcaatcttaactgctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctattagatatcatccacaatattctaataaactgtattttatcaatcttaactgctta 560
Query: 361 ttctgtaacccttttgacaccagattatacttcaacaaaaatattctttcagttatatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctgtaacccttttgacaccagattatacttcaacaaaaatattctttcagttatatat 620
Query: 421 atctgaacatttgaaaatcactttaatggctcataaactaaaaagaatatcacaccattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atctgaacatttgaaaatcactttaatggctcataaactaaaaagaatatcacaccattt 680
Query: 481 caaaggtcaacatagcaaatgcatcacactacatttacatcaagaggtatagcattaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caaaggtcaacatagcaaatgcatcacactacatttacatcaagaggtatagcattaatt 740
Query: 541 atagcaggtacagcccattgtccgtcactggcacaacagggtgactgaccatgtaaacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atagcaggtacagcccattgtccgtcactggcacaacagggtgactgaccatgtaaacaa 800
Query: 601 gtttcagcacacagctcaaccggaccagctaagaagacagga 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtttcagcacacagctcaaccggaccagctaagaagacagga 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
