Query= MSMg01no298_l18.b1 MSMg01no298_l18.b1 CHROMAT_FILE:
MSMg01no298_l18.b1 PHD_FILE: MSMg01no298_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:29 2005
(378 letters)
>mm_chr14_79521205_79521982
Length = 778
Score = 661 bits (342), Expect = 0.0
Identities = 366/374 (97%), Gaps = 2/374 (0%)
Strand = Plus / Minus
Query: 5 ggaattccagaccat-tttcctacctcttaagtcctgggagtagaggtgtgctacaacac 63
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggaattccagaccatcttt-ctacctcttaagtcctgggagtagaggtgtgctacaacac 483
Query: 64 cctggtatggttttttcccttttgctaagatacaaatgtgtgccttcatcttgcacaact 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cctggtatggtttttttgtttttgctaagatacaaatgtgtgccttcatcttgcacaact 423
Query: 124 tttgattccacaatgaacctgcaaacacataggtaatagctttttttcttcaaatgcata 183
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 422 tttgattccacaatgaacctgcaaacacatagataatagctttttttcttcaaatgcata 363
Query: 184 aggagaattactgttttaaccagcggcccaaccctatttatttatcctacaaatcataag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aggagaattactgttttaaccagcggcccaaccctatttatttatcctacaaatcataag 303
Query: 244 tggcgtgcaacacagctgtatcataaccataactacaatatagggcttgttcagcataaa 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 302 tggcgtgcaacacagctgtatcataaccataactacaataaagggcttgttcagcataaa 243
Query: 304 gggctcattctaagaggtcttctataattgtctacttgataaaatattttttaataaaag 363
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 242 gggctcattctaagaggtcttctagaattgtctacttgataaaatattttttaataaaag 183
Query: 364 taaattttgagggc 377
||||||||||||||
Sbjct: 182 taaattttgagggc 169
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_l18.g1 MSMg01no298_l18.g1 CHROMAT_FILE:
MSMg01no298_l18.g1 PHD_FILE: MSMg01no298_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:29 2005
(469 letters)
>mm_chr14_79345769_79346638
Length = 870
Score = 816 bits (422), Expect = 0.0
Identities = 454/470 (96%), Gaps = 11/470 (2%)
Strand = Plus / Plus
Query: 1 aattcctttattatggttgcacaaataatttttttccttaggcttctggaaatccctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aattcctttattatggttgcacaaataatttttttccttaggcttctggaaattagtgat 260
Query: 61 tgtctgtgggatctaagtctccagaatgaagactaaactgggctgttgtttttgaatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtctgtgggatctaagtctccagaatgaagactaaactgggctgttgtttttgaatatt 320
Query: 121 gagtttgaacatgattttcttctgaacactgttttctggagttctgtcatccttttcaat 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 gagtttgaacatgattttcttctgaatactgttttctggagttctgtcatccttttcaat 380
Query: 181 agtagatgg-tgttcatgcattggcctgcgtatatctttcattttagtgataatgttcta 239
||||||||| |||||||| | |||||||||||||||||||||||||||||||
Sbjct: 381 agtagatggttgttcatg--------t--gtatatctttcattttagtgataatgttcta 430
Query: 240 gagtgagtataagtgtttaatattttttaaacccctctgtttttcatattgaaaaaaccc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gagtgagtataagtgtttaatattttttaaacccctctgtttttcatattgaaaaaaccc 490
Query: 300 tatgcatgggttttttaaaaatttcaattactatttctatgtgttcacatacatatttgc 359
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tatgcatgggtttttttaaaatttcaattactatttctatgtgttcacatacatatttgc 550
Query: 360 tttgtgtgttcactttttaatatggaagctagtataagatagtcagtgttaaagtgttaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tttgtgtgttcactttttaatatggaagctagtataagatagtcagtgttaaagtgttaa 610
Query: 420 tggttcacataaagtagtcagtgttagagtgttaatagttggttcacatc 469
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tggttcacataaagtagtcagtgttagagtgttaatagttggttcacatc 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 870
Length adjustment: 10
Effective length of query: 459
Effective length of database: 860
Effective search space: 394740
Effective search space used: 394740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
