Query= MSMg01no299_b16.b1 MSMg01no299_b16.b1 CHROMAT_FILE:
MSMg01no299_b16.b1 PHD_FILE: MSMg01no299_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:56 2005
(583 letters)
>mm_chr14_87865859_87866842
Length = 984
Score = 1106 bits (572), Expect = 0.0
Identities = 578/580 (99%), Gaps = 1/580 (0%)
Strand = Plus / Plus
Query: 5 gaattc-acaatgtctacaaagcgcctgccttggctcctggtacaatttttgcatgttaa 63
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacaatgtctataaagcgcctgccttggctcctggtacaatttttgcatgttaa 264
Query: 64 ttatagtatagcattagaaaatcattcttgtttattttattcttactgttgtttgagaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttatagtatagcattagaaaatcattcttgtttattttattcttactgttgtttgagaga 324
Query: 124 ggtttgccatatatacgagaacagcttgaaactggctgtgcggccaagggtgcctcatct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtttgccatatatacgagaacagcttgaaactggctgtgcggccaagggtgcctcatct 384
Query: 184 tggttgatcctctgggccttagcctcgcaggtgctaggcttacagatgtgttatctgtca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggttgatcctctgggccttagcctcgcaggtgctaggcttacagatgtgttatctgtca 444
Query: 244 agtggtagttatctgattatttgtttcatatgtgtgggtgttttgcctgcatggatgtgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtggtagttatctgattatttgtttcatatgtgtgggtgttttgcctgcatggatgtgt 504
Query: 304 gtgtaccccatgtgtacctggggccaatagagggcagaagagaggggtagctcttctgaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgtaccccatgtgtacctggggccaatagagggcagaagagaggggtagctcttctgaa 564
Query: 364 atggaggttacagatggttgttagcccctatgtgggtgtgggtgctagaaattcaactag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atggaggttacagatggttgttagcccctatgtgggtgtgggtgctagaaattcaactag 624
Query: 424 gtcccccaaaagagcagtcagagctcttaacaactgagccatcttcctaacttccagaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtcccccaaaagagcagtcagagctcttaacaactgagccatcttcctaacttccagaaa 684
Query: 484 tatttttttattcaagtaggtaaaaaattactctatttattcacttatttacttaatgcg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tatttttttattcaagtaggtaaaaaattactctatttattcacttatttacttaatgcg 744
Query: 544 cgtgcacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 583
||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cgtgcacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 984
Length adjustment: 10
Effective length of query: 573
Effective length of database: 974
Effective search space: 558102
Effective search space used: 558102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_b16.g1 MSMg01no299_b16.g1 CHROMAT_FILE:
MSMg01no299_b16.g1 PHD_FILE: MSMg01no299_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:56 2005
(639 letters)
>mm_chr14_88027387_88028425
Length = 1039
Score = 1236 bits (639), Expect = 0.0
Identities = 639/639 (100%)
Strand = Plus / Minus
Query: 1 atcagcctgttccattttcctaggagccacataattggctaaacacacggaaagaagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 atcagcctgttccattttcctaggagccacataattggctaaacacacggaaagaagaca 780
Query: 61 gaatccaaactccagggatcagcaaataggaaagaagtcaatagaataaatgtttatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gaatccaaactccagggatcagcaaataggaaagaagtcaatagaataaatgtttatgca 720
Query: 121 tttagatttacatcatggtttccatttcttgtcagatggaaatggtctcccatgggaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tttagatttacatcatggtttccatttcttgtcagatggaaatggtctcccatgggaata 660
Query: 181 attatctgcccttccacatgtccctttcctgggccatctacatcaaacacatttcttagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 attatctgcccttccacatgtccctttcctgggccatctacatcaaacacatttcttagc 600
Query: 241 ctggataacttttacttcctttctcgttaacttgggttcatctaagtcaacaaagaattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ctggataacttttacttcctttctcgttaacttgggttcatctaagtcaacaaagaattc 540
Query: 301 attgattcaccggctatacaccaagcactacatgaaaccttggatttccaagataaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 attgattcaccggctatacaccaagcactacatgaaaccttggatttccaagataaaaga 480
Query: 361 gtccctcctctcaaagaatttcctcctttttccaggaaaataatttttaaaagcctccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gtccctcctctcaaagaatttcctcctttttccaggaaaataatttttaaaagcctccaa 420
Query: 421 agggaccactttgaagatagctgtaagcctactttgtgacttaaacactcagtttgagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 agggaccactttgaagatagctgtaagcctactttgtgacttaaacactcagtttgagat 360
Query: 481 ggaagttctcatatctaaaacttttctgagactatctgcatcaggagagcaaacacataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ggaagttctcatatctaaaacttttctgagactatctgcatcaggagagcaaacacataa 300
Query: 541 aacaagatgcctacgacagctgactgctagctgtggatattaattatattaacactttag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aacaagatgcctacgacagctgactgctagctgtggatattaattatattaacactttag 240
Query: 601 cgttgctttacctctagagtattttattgtaaaaagtga 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cgttgctttacctctagagtattttattgtaaaaagtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
