Query= MSMg01no299_n01.b1 MSMg01no299_n01.b1 CHROMAT_FILE:
MSMg01no299_n01.b1 PHD_FILE: MSMg01no299_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:50 2005
(596 letters)
>mm_chr14_118078574_118079569
Length = 996
Score = 903 bits (467), Expect = 0.0
Identities = 504/517 (97%), Gaps = 4/517 (0%)
Strand = Plus / Minus
Query: 3 ggcttcataggaagaacgagccactattgtcttcaataatccactggaagttactattta 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 515 ggcttcataggaagaacgagccactattgtcttcaataacccactggaagttactattta 456
Query: 63 gaacttaggaagtaagtcaccacatgttattgaagttttaattctaaggatgggtaacca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gaacttaggaagtaagtcaccacatgttattgaagttttaattctaaggatgggtaacca 396
Query: 123 ataaacactaaatgcattttccatgtattttcacaacagcgttatttaaggaaacagaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ataaacactaaatgcattttccatgtattttcacaacagcgttatttaaggaaacagaga 336
Query: 183 gcaaaagatatggtagaaaggatgctattcctgtcctctattgtgtcataagaagcccat 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 335 gcaaaagatatggtagaaaggatgctattcctgtcctctattgtgtcataagaaacccat 276
Query: 243 tccaagtggtctccaggcaactaatttccaaagctacaccttgttttaaaagtgccggaa 302
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 275 tccaagtggtctccaggcaactaatttccaaagatacaccttgttttaaaagtgccggaa 216
Query: 303 tgagatttaatacttttgtggtgttttggatgagaaatgtctcctataggctcctgtaac 362
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tgagatttaatacatttgtggtgttttggatgagaaatgtctcctataggctcctgtaac 156
Query: 363 agacagaacattctgtgctcaatggtagtgctgtttgaggatgctatggagtctttaaga 422
||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||
Sbjct: 155 agacagaacattctgtgctcagtggtagtgctgtttgaggatgccatgaagtctgtaaga 96
Query: 423 caaagcct--caccgggcggtggtggcgcacacctttaatcccagcacttgggaggcaga 480
|||||||| | || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 caaagccttgc-cc-ggtggtggtggcgcacacctttaatcccagcacttgggaggcaga 38
Query: 481 ggcaggcggatttctgagttcgaggccagcctggtct 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 ggcaggcggatttctgagttcgaggccagcctggtct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_n01.g1 MSMg01no299_n01.g1 CHROMAT_FILE:
MSMg01no299_n01.g1 PHD_FILE: MSMg01no299_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:50 2005
(291 letters)
>mm_chr14_117911727_117912412
Length = 686
Score = 532 bits (275), Expect = e-155
Identities = 285/291 (97%), Gaps = 5/291 (1%)
Strand = Plus / Plus
Query: 1 cttggtagaaatgtctacttgaacatcctcctcatccctcaatgttttaagtccaaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttggtagaaatgtctacttgaacatcctcctcatccctcaatgttttaagtccaaaata 260
Query: 61 gaatgcatatttctccctgggcgttcttccttctcaacatagagctctgctcacagatat 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gaatgcatatttctccctgggcgttcttccttctcaacgtagagctctgctcacagatat 320
Query: 121 agcatcctccagataccttgagccacctgggatgggctccagctgcattttgcacactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcatcctccagataccttgagccacctgggatgggctccagctgcattttgcacactct 380
Query: 181 gtgatggcccaggaataccgtgccaagcatctccctgtctcatttattaactcctttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgatggcccaggaataccgtgccaagcatctccctgtctcatttattaactcctttaaa 440
Query: 241 gctctcagtatcttctctagtctccatgggtgaattgttctcacaatctac 291
||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 gctctcagtatct-----agtctccatgggtgaattgttctcacaatctac 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 686
Length adjustment: 9
Effective length of query: 282
Effective length of database: 677
Effective search space: 190914
Effective search space used: 190914
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
