Query= MSMg01no300_n04.b1 MSMg01no300_n04.b1 CHROMAT_FILE:
MSMg01no300_n04.b1 PHD_FILE: MSMg01no300_n04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:03 2005
(240 letters)
>mm_chr14_12499574_12500214
Length = 641
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%), Gaps = 1/239 (0%)
Strand = Plus / Minus
Query: 1 cctgcctcccaccttttctgccacaattattaactaccaaaatgttcttgcaccaccgtg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cctgcctcccatcttttctgccacaattattaactaccaaaatgttcttgcaccaccgtg 380
Query: 61 tctgtgctccttgaactgacacaatgacagagacaagcagtttgctctctgtggggacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctgtgctccttgaactgacacaatgacagagacaagcagtttgctctctgtggggacca 320
Query: 121 tgcacagcactctattttaataagaatacaaaacctttcccaccttttttcctattttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgcacagcactctattttaataagaatacaaaacctttcccaccttttttcctattttaa 260
Query: 181 taaaaacttccttggtcataactttccaactcaacattcattcattcat-cccctgacc 238
|||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 259 taaaaacttccttggtcagaactttccaactcaacattcattcattcatccccctgacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 641
Length adjustment: 9
Effective length of query: 231
Effective length of database: 632
Effective search space: 145992
Effective search space used: 145992
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no300_n04.g1 MSMg01no300_n04.g1 CHROMAT_FILE:
MSMg01no300_n04.g1 PHD_FILE: MSMg01no300_n04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:03 2005
(214 letters)
>mm_chr14_12308641_12309254
Length = 614
Score = 337 bits (174), Expect = 4e-97
Identities = 200/214 (93%), Gaps = 9/214 (4%)
Strand = Plus / Plus
Query: 1 ctcccattctgtgggctgcctgttctatttgctgcctgttctatttgttctatttgttct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ctcccattctgtgggctgcctgttctatttgctgcctgttctatttgttct--------- 260
Query: 61 gttttccttgtgtggatacttttgcttctatgtgaatgtcttctcagctcttggggctgt 120
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 261 gttttccttgtgtggatacttttgcttctatgtggatgtcttgtcagctcttggggctgt 320
Query: 121 ctcctgtgttgtgaactgacccctgttcaggaaaatcttactactcctacataccgaagt 180
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 321 ctcctgtgttgtgaactgacccctattcaggaaaatcttactactcctacatactgaagt 380
Query: 181 gttctaattttcttattaagcatttctctctcta 214
||||||||||||||||||| ||||||||||||||
Sbjct: 381 gttctaattttcttattaaacatttctctctcta 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
