Query= MSMg01no301_k23.b1 MSMg01no301_k23.b1 CHROMAT_FILE:
MSMg01no301_k23.b1 PHD_FILE: MSMg01no301_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:08 2005
(330 letters)
>mm_chr14_53700373_53701103
Length = 731
Score = 586 bits (303), Expect = e-172
Identities = 321/327 (98%), Gaps = 1/327 (0%)
Strand = Plus / Plus
Query: 5 gaattctgaagaattgccctttaccacatgatctagaactagatttattaattgcagaat 64
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattctgaagaattgccctttaccacatgatctagaactagctttattaattgcagaat 264
Query: 65 ttaaatagaccctaccacttagtaagggaggaaga-tttttttttcagacgccagtgttt 123
|||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 265 ttaaatagaccctagcacttagtaagggaggaagattttttttttcagacaccagtgttt 324
Query: 124 catggggaaattcatggttgtgaggctttaaaaaaattaatctttatcagctgtaggagc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catggggaaattcatggttgtgaggctttaaaaaaattaatctttatcagctgtaggagc 384
Query: 184 tctctggtgaagtttttggggtcacttaagtacacaatcatatcatctgcatatagtgat 243
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctctggtggagtttttggggtcacttaagtacacaatcatatcatctgcatatagtgat 444
Query: 244 attttgacttcttcctttccaatttgtatccctttaatcctcttttgttgtctaattgct 303
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 attttgacttcttcctttccaatttgtatccctttaatcctcttttcttgtctaattgct 504
Query: 304 ctagctagaacttcaagtactgtatag 330
|||||||||||||||||||||||||||
Sbjct: 505 ctagctagaacttcaagtactgtatag 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 731
Length adjustment: 9
Effective length of query: 321
Effective length of database: 722
Effective search space: 231762
Effective search space used: 231762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_k23.g1 MSMg01no301_k23.g1 CHROMAT_FILE:
MSMg01no301_k23.g1 PHD_FILE: MSMg01no301_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:08 2005
(656 letters)
>mm_chr14_54458466_54459521
Length = 1056
Score = 1048 bits (542), Expect = 0.0
Identities = 554/558 (99%)
Strand = Plus / Minus
Query: 1 ttgcctccaataaagactgcttggtaatcctgccagaaatttttggagcgtgagagttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttgcctccaataaagactgcttggtaatcctgccagaaatttttggagcgtgagagttta 499
Query: 61 tcctttaatacttttattctaacaacccagaaattatgttcatattttaaaattatattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tcctttaatacttttattctaacaacccagaaattatgttcatattttaaaattatattg 439
Query: 121 aaagtactttttccaaatgagttttgctaaaatacgttattcctagatctcacatggtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aaagtactttttccaaatgagttttgctaaaatacgttattcctagatctcacatggtga 379
Query: 181 tatttatcttcttaaatccatcatttcacagacacaaagggccttcttttctttattatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tatttatcttcttaaatccatcatttcacagacacaaagggccttcttttctttattatt 319
Query: 241 tctgttgttaagtctttgaagagctgttcatccctgcttctgttttcatcctatagatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tctgttgttaagtctttgaagagctgttcatccctgcttctgttttcatcctatagatcc 259
Query: 301 ctcggcacacatttcttaagacaaaggtgctctattgtaatcacttgcatttgcctcgtg 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctcggcacacatttcttaaaacaaaggtgctctattgtaatcacttgcatttgcctcgtg 199
Query: 361 tatcagtcttagagaaactgacagagcagaatgcctgtgagttaatgggtagaggctcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tatcagtcttagagaaactgacagagcagaatgcctgtgagttaatgggtagaggctcag 139
Query: 421 aattttatgcttatgcacttctgagaggagtaagggaagtaaaaactgaggggcagttgg 480
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 138 aattttatgcttatgcacttctgagaggagtaaggaaagtaaaagctgaggggcagttgg 79
Query: 481 agggtcagagaaggaattctctctcaaccaactaatcgatgaggcacctctagctgctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 agggtcagagaaggaattctctctcaaccaactaatcgatgaggcacctctagctgctga 19
Query: 541 agtgtaatctgagttcat 558
||||| ||||||||||||
Sbjct: 18 agtgtgatctgagttcat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
