Query= MSMg01no302_p15.b1 MSMg01no302_p15.b1 CHROMAT_FILE:
MSMg01no302_p15.b1 PHD_FILE: MSMg01no302_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:45 2005
(315 letters)
>mm_chr14_64303326_64304040
Length = 715
Score = 561 bits (290), Expect = e-164
Identities = 305/310 (98%)
Strand = Plus / Plus
Query: 5 gaattcttggaactgctaactttcttcacagcccttgcagggctttcgtggaatacagtt 64
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggaactgctaactttcctcgcagcccttgcagggctttcgtggaatacagtt 264
Query: 65 tctaccctgacagcagctggcactatgtcttcagccctcaggctctggtttacttctatc 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctaccctgacagcagctgtcactatgtcttcagccctcaggctctggtttacttctatc 324
Query: 125 actgggttcttccctattcaggtaggtcgcttgaagactcttcaagttggaaggggtctt 184
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actgggttcttccctatccaggtaggtcgcttgaagactcttcaagttggaaggggtctt 384
Query: 185 tgtgtaggctctcatctttacaggacagaggtccctcctctgccttctgtccttgaacat 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgtaggctctcatctttacaggacagaggtccctcctctgccttctgtccttgaacat 444
Query: 245 ttctgatggcagagagtgcactgtttctcatccctgatggcctttatgtgtgaggttgga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttctgatggcagagagtgcactgtttctcatccctgatggcctttatgtgtgaggttgga 504
Query: 305 tgtcataggt 314
||||||||||
Sbjct: 505 tgtcataggt 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_p15.g1 MSMg01no302_p15.g1 CHROMAT_FILE:
MSMg01no302_p15.g1 PHD_FILE: MSMg01no302_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:45 2005
(634 letters)
>mm_chr14_64470737_64471769
Length = 1033
Score = 1123 bits (581), Expect = 0.0
Identities = 622/639 (97%), Gaps = 11/639 (1%)
Strand = Plus / Minus
Query: 1 aagggagaaccttgaactttaacatttgacccattaccttgcaggggtttcagggaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 aagggagaaccttgaactttaacatttgacccattaccttgcaggggtttcagggaaatc 774
Query: 61 tcagagaacactactaagtatgcccagggtcctttttttggcttctggctacagcactgg 120
|||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 773 tcagagaacactaccaagtatgcccagggtcc-ttttttggcttctggctatggcactgg 715
Query: 121 cttctcttgggctgactggagggaataggggggcttggttgaggaagggaggctgcccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 cttctcttgggctgactggagggaataggggggcttggttgaggaagggaggctgcccct 655
Query: 181 tgggagtaggctgtaaagggctgggacagcagttctttgaaggtataaagccctttaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tgggagtaggctgtaaagggctgggacagcagttctttgaaggtataaagccctttaaaa 595
Query: 241 acctccaactcaggagtttgatctctttcaagaaacagcctccagtctaactggaattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 594 acctccaactcaggagtttgatctctttcaagaaacagcctccagtctaactggaataaa 535
Query: 301 aaaaaaagtttctctgtgtaatatgacaaa---ggg-ggggaaaaaagacttttaagacc 356
|||||||||||||||||||||||||||||| ||| |||| |||||||||||||||
Sbjct: 534 aaaaaaagtttctctgtgtaatatgacaaagtggggagggg----aagacttttaagacc 479
Query: 357 tggaagctgggaccaacaaaacaagcctagtggccctaatccatgataatacagtaaaac 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tggaagctgggaccaacaaaacaagcctagtggccctaatccatgataatacagtaaaac 419
Query: 417 tcaaggggcctcctcagcaggctgtggactgtgttccaaaagttcgtataaaagcacatt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tcaaggggcctcctcagcaggctgtggactgtgttccaaaagttcgtataaaagcacatt 359
Query: 477 ttagattaaatctttataagggacaaatctcaagggtcctccagagaaaaaaatggccac 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttagattaaatctttataagggacaaatctcaagggtcctccagagaaaaaaatggccac 299
Query: 537 ataagaatggggtcactaagctccctgcaagaggaaggggaggaggctgcgtcactgttg 596
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 298 ataagaatggggtcactaagctccctgcaagaggaaggggagaaggctgcgtcactgttg 239
Query: 597 gggaaatgacatttatggaggtcctttgaa-ctatcatt 634
|||||||||||||||||||||||||| ||| ||||||||
Sbjct: 238 gggaaatgacatttatggaggtcctt-gaaactatcatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1033
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1023
Effective search space: 638352
Effective search space used: 638352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
