Query= MSMg01no303_e06.b1 MSMg01no303_e06.b1 CHROMAT_FILE:
MSMg01no303_e06.b1 PHD_FILE: MSMg01no303_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:08 2005
(549 letters)
>mm_chr14_14394804_14395752
Length = 949
Score = 961 bits (497), Expect = 0.0
Identities = 530/549 (96%), Gaps = 13/549 (2%)
Strand = Plus / Minus
Query: 1 gtctccaaccaatgccagcttctgctgttcctttccctcacaggtgggcacttcaaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gtctccaaccaatgccagcttctgctgttcctttccctcacaggtgggcacttcaaaggt 642
Query: 61 cacctgttgcagcctgaaaccatcagaggcaagaagacaattgacatgttgtagaagttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cacctgttgcagcctgaaaccatcagaggcaagaagacaattgacatgttgtagaagttg 582
Query: 121 aaatgcccactgtcacatctgctaatactatccaccatgaaacatccagtgaagaatttg 180
||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 581 aaatgaccactgtcacatctgctaacactaaccaccatgaaacatccagtgaagaatttg 522
Query: 181 taagtctatttacagattctagcttgacctagggaaatgaataccacagagatggtaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 taagtctatttacagattctagcttgacctagggaaatgaataccacagagatggtaatt 462
Query: 241 catcctgcagaggtgagaaggggagagagactctgaaatcagcccagccttctgctgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 catcctgcagaggtgagaaggggagagagactctgaaatcagcccagccttctgctgaga 402
Query: 301 cttaagaaagtggcccagtaagccttgggtcccttctgtgtttccagcctctttcctcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cttaagaaagtggcccagtaagccttgggtcccttctgtgtttccagcctctttcctcag 342
Query: 361 tgtgttagggcctgcccttctactccacacataacctgcctaacctgctgtagttataat 420
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 341 tgtgttagggcctgcccttctgctccacacataacctgcctaacctgctgcagttataat 282
Query: 421 ctttctgtgcattttccatggacttttccatctgtgcttgcccactaagatgcaattctc 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 281 ctttctgtgcattttccatggacttttccacctgtgcttgcccactaagatgcaattctc 222
Query: 481 acatcctccctggggaacctcctgctaactactcactattgtgctttctttccttttgac 540
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 221 acatcctccctggggaac-------------ctcactattgtgctttctttccttttgac 175
Query: 541 attttattg 549
|||||||||
Sbjct: 174 attttattg 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_e06.g1 MSMg01no303_e06.g1 CHROMAT_FILE:
MSMg01no303_e06.g1 PHD_FILE: MSMg01no303_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:08 2005
(293 letters)
>mm_chr14_14346394_14347086
Length = 693
Score = 516 bits (267), Expect = e-151
Identities = 287/295 (97%), Gaps = 4/295 (1%)
Strand = Plus / Plus
Query: 1 tattcatcctacgtcatcctgcacatatatgaatggataccattg--tttccgcacaaac 58
||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 201 tattcatcctacgtcatcctgcacatatatgaatggataccattgcatat--gcacaaac 258
Query: 59 acacatgtgaacaggacctttgatatataaatgagagaatgggaacaaaagctttaagca 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acacatgtgaacaggacctttgatatataaatgagagaatgggaacaaaagctttaagca 318
Query: 119 aatagaagaaatttcttagataataatactaagaggagatttgttccccttatcaatggc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 319 aatagaagaaatttcttagataataatactaagaggagatttgttccccttataaatggc 378
Query: 179 tacactcagggagtccaacagaataattttcctttctcccctgtccctctcatgtttaag 238
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 379 tacacccagggagtccaacagaatacttttcctttctcccctgtccctctcatgtttaag 438
Query: 239 caccaccctctttggggacggtgcctcatgcttccctcttcctgaagatttttta 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caccaccctctttggggacggtgcctcatgcttccctcttcctgaagatttttta 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
