Query= MSMg01no304_j05.b1 MSMg01no304_j05.b1 CHROMAT_FILE:
MSMg01no304_j05.b1 PHD_FILE: MSMg01no304_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:43:24 2005
(284 letters)
>mm_chr14_78341810_78342493
Length = 684
Score = 369 bits (191), Expect = e-107
Identities = 217/227 (95%), Gaps = 4/227 (1%)
Strand = Plus / Minus
Query: 1 gactgatctttagcatttagtgaaacacaaactcgagaacctgggttactttgaaaagac 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 367 gactgatctttagcatttagtgaaacacaaactcaagaacctgggttactttgaaaagac 308
Query: 61 aggaggctgggtggaccagcctccaacctttgaaaactccaaaaatcgacttcttcaact 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aggaggctgggtggaccagtctccaacctttgaaaactccaaaaatcgacttcttcaact 248
Query: 121 tcccagccctggtcttaacttggtaaggagcaatatacagggttgggtatatatgtgtat 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcgcagccctggtcttaacttggtaaggagcaatatacagggttgggtatatatgtgtat 188
Query: 181 agatatagata--gatatagatatagatagatagagatagagataga 225
||||||||||| |||||| ||||||||| |||| ||||| |||||
Sbjct: 187 agatatagatatagatataaatatagata--tagacatagacataga 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no304_j05.g1 MSMg01no304_j05.g1 CHROMAT_FILE:
MSMg01no304_j05.g1 PHD_FILE: MSMg01no304_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:43:24 2005
(714 letters)
>mm_chr14_78166232_78167346
Length = 1115
Score = 1359 bits (703), Expect = 0.0
Identities = 712/715 (99%), Gaps = 1/715 (0%)
Strand = Plus / Plus
Query: 1 gccgttttctggagcacatcactttccaagacttggactagttcactcagctcactggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccgttttctggagcacatcactttccaagacttggactagttcactcagctcactggtt 260
Query: 61 tctccagatataactgggatccctggagcctctcatgattattcagcactgggagaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctccagatataactgggatccctggagcctctcatgattattcagcactgggagaaggg 320
Query: 121 ggt-gtaaggcagacttggggtgagtttctctctctcccatcttcacagtatttcccatg 179
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtggtaaggcagacttggggtgagtttctctctctcccatcttcacagtatttcccatg 380
Query: 180 ctggggagccatccaatgctatcaaatgagccatagaaactaatatggctttaatgaaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggggagccatccaatgctatcaaatgagccatagaaactaatatggctttaatgaaat 440
Query: 240 gagggccgtggactggcagtactttattttaaggactctcaggtttgaggaaacataatt 299
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 gagggccgtggactggcagtactttattttaaggactctcagggctgaggaaacataatt 500
Query: 300 tattcatatcccgttactccccaggaagagaaagcagatgttttatctatttccaagttg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattcatatcccgttactccccaggaagagaaagcagatgttttatctatttccaagttg 560
Query: 360 gaagtttaaggactatgatcaataggtaggatcccatgatgaacatagttcctggctgaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagtttaaggactatgatcaataggtaggatcccatgatgaacatagttcctggctgaa 620
Query: 420 ctccagtcaccctcctcccactacaaggactgaaagtgctagaggctcctgttcctttac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctccagtcaccctcctcccactacaaggactgaaagtgctagaggctcctgttcctttac 680
Query: 480 aagtgacaatggagcagcagaaagatggtgtacacttccaggatctatccttcctgatca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagtgacaatggagcagcagaaagatggtgtacacttccaggatctatccttcctgatca 740
Query: 540 aaggagggagacacataatgagaattctctcattaggaagctagacagatgtcagagggc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaggagggagacacataatgagaattctctcattaggaagctagacagatgtcagagggc 800
Query: 600 ttggaggccattgagatggaccctgcctcctgtttccttggaaactctagaaaaggaaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttggaggccattgagatggaccctgcctcctgtttccttggaaactctagaaaaggaaaa 860
Query: 660 tccttagcatttaaatgagcataggacaagttggaggaatccaggcttctgtgag 714
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tccttagcatttaaatgagcataggacaagttggaggaatccaggcttctgtgag 915
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 714
Length of database: 1115
Length adjustment: 10
Effective length of query: 704
Effective length of database: 1105
Effective search space: 777920
Effective search space used: 777920
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
