Query= MSMg01no305_i12.b1 MSMg01no305_i12.b1 CHROMAT_FILE:
MSMg01no305_i12.b1 PHD_FILE: MSMg01no305_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:35 2005
(421 letters)
>mm_chr14_79607650_79608471
Length = 822
Score = 748 bits (387), Expect = 0.0
Identities = 402/407 (98%), Gaps = 1/407 (0%)
Strand = Plus / Plus
Query: 16 gaattccaaatctcttttc-caagatccccatggatcatagagccaatgtatccaatgag 74
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 216 gaattccaaatctcttttcacaagatccgcatggatcatagagccaatgtatccaatgag 275
Query: 75 gctggcatggcttctgcttctgcaaggaaagtggctttaagggtcagggcctcctaggga 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gctggcatggcttctgcttctgcaaggaaagtggctttaagggtcagggcctcctaggga 335
Query: 135 gtatgtggttcctttgcataggtccacacaggtcttctgtgaacagagactgtatgacac 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtatgtggttcctttgcataggtccacacaggtcttctgtgaacagagactgtatgacac 395
Query: 195 gtgctataagtcagactccccaagggatgagctacaggagagagagatcaatgatatttg 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gtgctataagtcagactccccaagggatgagctacaggagagagagatcaatgatatttg 455
Query: 255 ggttgaaaagacctagtttcttagcccgctccaccccttccagccacggctacctgagac 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggttgaaaagacctagtttcttagcccgctccaccccttccagccacggctacctgagac 515
Query: 315 accccaaagttcttggatcaggttcttcacccctgaaatgaggacaatcccatctctttt 374
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 516 accccaaagttcttggatcaggttcttcacccctgaaatgaggacaatcccatctcccct 575
Query: 375 ttatcagagaactgaaataaaataaccaagggactccatcaaccata 421
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttatcagagaactgaaataaaataaccaagggactccatcaaccata 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 822
Length adjustment: 9
Effective length of query: 412
Effective length of database: 813
Effective search space: 334956
Effective search space used: 334956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_i12.g1 MSMg01no305_i12.g1 CHROMAT_FILE:
MSMg01no305_i12.g1 PHD_FILE: MSMg01no305_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:35 2005
(380 letters)
>mm_chr14_79751961_79752740
Length = 780
Score = 650 bits (336), Expect = 0.0
Identities = 369/380 (97%)
Strand = Plus / Minus
Query: 1 caagaattgaactgataatacaacgtgggctaaaacgggaccaaagactgaaaatgtttt 60
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 425 caagaattgaactgataatagaaagtgggctaaaacgggaccaaagactgaaaatgtttt 366
Query: 61 aataaataatcaaacaaatgtttaaagtaaatatttcaaccaatgacaaaaatataatgc 120
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 365 cataaataatcaaacaaatgtttaaagtaaatattccaaccaatgacaaaaatataatgc 306
Query: 121 cctacattgaagctaggaagttatatatatattttataaagttcttacacttatctgaac 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 305 cctacattgaagctaggaagttatatatattttttataaagttcttacacttacctgaac 246
Query: 181 taacaaatatttgtaacaaatccagggatacctcgctctgtgtatgtctctctgtctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 taacaaatatttgtaacaaatccagggatacctcgctctgtgtatgtctctctgtctctg 186
Query: 241 tctttctgtcttactatgcctcaggctggttttaaactcaaaatcctcctgccttagtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tctttctgtcttactatgcctcaggctggttttaaactcaaaatcctcctgccttagtct 126
Query: 301 cctaggtgctgggctgataggcatgcaccttttttagtgttgcttgcttttaatagtatg 360
|||||||||||| |||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 125 cctaggtgctggactgataggcatgcaccatgtccagtgttgcttgcttttaatagtatg 66
Query: 361 cggcagaggggcggtagaga 380
||||||||||||||||||||
Sbjct: 65 cggcagaggggcggtagaga 46
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
