ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAGCAAATATTACTATGGGAATGAGTATGGTCTAAATACGATATT
ATATGTAATAAGTTTCTCTATAAGAACGATAACAATAAAACAAATGCACC
TGATGAGGTTTAGTCATATTGGTTCATCCTATAAGGGATGGCTTGTCCAA
TAATGTGTATTTGCATGCTGGGGAGCCTGAAAACCAAATGCTGTAGATGT
TGACCTCATGACGGATCATCATTCTTTAGTACTGAAGGCCTAAAAGAGTT
GGAGAGAGCCATTGGTTTTCAGTCCACATTGGAATACAGAGGAAGTTAGG
TTCTAACTGCAACAAAGAATAATAGCAGAAACAGCAGTGAGAGAGAAAAA
ACTCACAGTGAAGGCAGGCAAGCAAACAGTACTGCTATGTCATTGGAGCT
CTTTGTGCAACTAGAAAGTTGTTGCCCTTCATTGGGGTCTGTCAACTTCA
TTCAGTGATCCCTAGAAATGCCTTCCAACCTATTGTCAAAAGATGTCACC
CTCAATTGATTCTCCATCAAATTAAGTTTTAAATCAAAGTAGATTATATA
TTTGTCAAAAAAAATATCAAGGATGATATTTAATGAATTCACATAAATAA
AAATAGAGGAGCTAAAACCTGCCACAGTCAGAGCCTCCTATCACTATTTC
TGAGACATAACTTCAGTGATGTTTCTGGAATTCACACCAAGGTGTTTCTG
AACAAAGGTTGTAACTTTTA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGACACTATTCTCACCAATAGTC
AGGTCATTGAAATACTATCTGACCAGAGACACAGTGAAACTAAGAGATGT
TATAAAACAAATGAATTTAACTGATAATATATAGAACATTTCACCCTTAA
ACAAAATAATATACCTTCTTCTCTTCCCCTCATAGAACCTTCTTCAAAAT
TGACCATGTAATACGTCTTAAAACACAACTCAACAGATACAAGAAGACTG
AAATAATTCTATGCATCCTATTATATCATCACAGACTAAGGCTAGATATC
AATAATAATANAATCNACTCCAAAAACCTGACATATACCCATTTAAATCA
AATAACTTGTTACGTAGTGATAATAAAAAAAAAAAAAAAGTGGGGGGGGA
AGTGAAAGACTTCCTGGAATTCAATGAAAATGGTGATATATCATACCCAA
ACTTGTGGAACACAATGAAAGCAGTGCTAAGAGGAAAATTCATAACACTA
AGTGCCCTTGAAAAGAAATAAAAGCTATCCTGCATAGCAACGAATAGCAC
ACATGAAAGGCCTGAAACAAACAAAGAAACAATCAAACTCACCTAAGAAA
AGTAGATTGCTGGAAATTGTCAAAATCAGTGCTGAAATCAACCAAATTGA
AACAAAGAGAACTATAANAGACCAACAAGAATCAACAAGACCAATAGCTG
ATTCTTTGAGAAAA

Query= MSMg01no306_o16.b1 MSMg01no306_o16.b1 CHROMAT_FILE:
MSMg01no306_o16.b1 PHD_FILE: MSMg01no306_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:50 2005
         (724 letters)



>mm_chr14_92452346_92453469
          Length = 1124

 Score =  845 bits (437), Expect = 0.0
 Identities = 443/445 (99%)
 Strand = Plus / Minus

                                                                        
Query: 280  acattggaatacagaggaagttaggttctaactgcaacaaagaataatagcagaaacagc 339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 acattggaatacagaggaagttaggttctaactgcaacaaagaataatagcagaaacagc 1065

                                                                        
Query: 340  agtgagagagaaaaaactcacagtgaaggcaggcaagcaaacagtactgctatgtcattg 399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 agtgagagagaaaaaactcacagtgaaggcaggcaagcaaacagtactgctatgtcattg 1005

                                                                        
Query: 400  gagctctttgtgcaactagaaagttgttgcccttcattggggtctgtcaacttcattcag 459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 gagctctttgtgcaactagaaagttgttgcccttcattggggtctgtcaacttcattcag 945

                                                                        
Query: 460  tgatccctagaaatgccttccaacctattgtcaaaagatgtcaccctcaattgattctcc 519
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944  tgatccctagaaatgccctccaacctattgtcaaaagatgtcaccctcaattgattctcc 885

                                                                        
Query: 520  atcaaattaagttttaaatcaaagtagattatatatttgtcaaaaaaaatatcaaggatg 579
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884  atcaaatcaagttttaaatcaaagtagattatatatttgtcaaaaaaaatatcaaggatg 825

                                                                        
Query: 580  atatttaatgaattcacataaataaaaatagaggagctaaaacctgccacagtcagagcc 639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824  atatttaatgaattcacataaataaaaatagaggagctaaaacctgccacagtcagagcc 765

                                                                        
Query: 640  tcctatcactatttctgagacataacttcagtgatgtttctggaattcacaccaaggtgt 699
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764  tcctatcactatttctgagacataacttcagtgatgtttctggaattcacaccaaggtgt 705

                                     
Query: 700  ttctgaacaaaggttgtaactttta 724
            |||||||||||||||||||||||||
Sbjct: 704  ttctgaacaaaggttgtaactttta 680


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 724
Length of database: 1124
Length adjustment: 10
Effective length of query: 714
Effective length of database: 1114
Effective search space:   795396
Effective search space used:   795396
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)