CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTTCTTTTTATCTGTTTGGCAACCAGATCTCAGCTCATTCCTTTG
AGGCCAGTCTTGGAGGGTGCTTCCTGATTTTTTTCTAATGCATTACAAGC
AAGTCAAAGGCTTTCTTTTCCGGTCTTAACCCATTCTATTCAGTCAAATT
TCTTACAGAAAACAAAAAGGAAATTGTTGGTTTCATTGACATACAGTTCT
TAGAAGAGTTAACATTATAGACACAGAAAATAACATGGCAGCTGCCAGGG
ACTAGAAAAAGGATGACAAGTTAATACTTAATGATTTCAGGTTTAAAATT
ATTAAAAGATTAAAAGAATTGTGGAGCTACTTGTTCATAATGGATACACA
ATACTGTGCTTGCATTCAACACCACTGAATTGAACACTCATAATGCTGAA
GATGGTACTTTTACGTTATGTGTATTTTATCATCATTAAAATTGTGGGGA
GTGGAGAATAACAATAAGCGGACTGGAAGGAGAGATGGTATAAGGGGGTA
GAATGGGGAATGACCAGGATGTAAAGTGAATAAATAAATAAATTAATTAA
TTAAAAAACCCCAAAGAGACAGAGAAACTAAGTAAACATGACAACCTAAT
ATTCTGTTACCCTAGAGCTGATGTTTCAAACTGAAAAAAAAAATGCCACT
TCGTAAAAATAAAACAAACT

CGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCTGTTTAGCTCTACCACATTTTTTTTT
TTTAATTTGGTCTTTGGTTTACTTGAGGTTAACTTCTTGAGGTCTTTGTA
TATTTTGGATATTAGTCTTTTGTCAAATGTAGGGTTAATGATGTCCTATT
GGTGGTGTCTTTTGCTTTATAGAAGCTTTTCAGTCTCATGAGATCTCATT
TATCAATAGTTAATCTTAGAGCCTGAGTCATTGGTGATCTGTTCAGGACA
TTTCCCCCTGAAATGTGCCAATGCATTCAAGGCTATCTCCCTCTTTCTCT
TCTATTAAATTCAGTATATATGGTTTAATGGTGAGGTCCTTGATCCAGTT
GGATTTGAGCTTTGTACACAATGATAAATATGGGTCTATTTTCATTCTCC
TACATACAGACCACCACTTAGACTAGAACCATTTACTGACAATGCATTCT
TTTTTCCATTGTATGTTTTTGGATTTGTTGTCAAAGACAAAGTACATGGA
TTTAATTCTGGGTCTTTGATTCTATTCCACTGATTGACCAGACTGTTTCT
GTACCAATACTATATGTGGTTTGGTTTTGTTTTTGTTTTTTATCACTATT
GCTTTTAGTTCAGCTTAAGGTCAGGGATGGTGCTTCCTCCAGAAGTTCTA
TTATTGAGAATTGTN

Query= MSMg01no307_a01.b1 MSMg01no307_a01.b1 CHROMAT_FILE:
MSMg01no307_a01.b1 PHD_FILE: MSMg01no307_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:56 2005
         (675 letters)



>mm_chr14_37166000_37167074
          Length = 1075

 Score =  617 bits (319), Expect = 0.0
 Identities = 356/369 (96%), Gaps = 4/369 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttctttttatctgtttggcaaccagatctcagctcattcctttgaggccagtc 64
           ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 366 gaattccttctttttatttgtttggcaaccagatctcagctcattactttgaggccagtc 307

                                                                       
Query: 65  ttggagggtgcttcctgatttttttctaatgcattacaagcaagtcaaaggctttctttt 124
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 306 ttggagggtgcttcctgattttttgctaatgcattacaagcaagtcaaaggctttctttt 247

                                                                       
Query: 125 ccggtcttaacccattcta-ttcagtcaaatttcttacagaaaacaaaaaggaaattgtt 183
           |||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 246 ccggtcttaacccatt-tatttcggtcaaatttcttacagaaaacaaaaaggaaattgtt 188

                                                                       
Query: 184 ggtttcattgacatacagttcttagaagagttaacattatagacacagaaaataacatgg 243
           ||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 187 ggtttcatttacatacagttcttagaagagttaacattatag--acagaaaataacatgg 130

                                                                       
Query: 244 cagctgccagggactagaaaaaggatgacaagttaatacttaatgatttcaggtttaaaa 303
           |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 129 cagctgccggggactaggaaaaggatgacaagttaatacttaatgattttaggtttaaaa 70

                                                                       
Query: 304 ttattaaaagattaaaagaattgtggagctacttgttcataatggatacacaatactgtg 363
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 69  ttattaaaagattaaaagaattgtggagctacttgttcatgatggatacacaatactgtg 10

                    
Query: 364 cttgcattc 372
           |||||||||
Sbjct: 9   cttgcattc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)