Query= MSMg01no307_l16.b1 MSMg01no307_l16.b1 CHROMAT_FILE:
MSMg01no307_l16.b1 PHD_FILE: MSMg01no307_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:51 2005
(669 letters)
>mm_chr14_33493724_33494792
Length = 1069
Score = 1143 bits (591), Expect = 0.0
Identities = 643/661 (97%), Gaps = 4/661 (0%)
Strand = Plus / Minus
Query: 12 atgtgcatgtccagctagctctgtcaatagaacaagagactcctaagtttagagaagagg 71
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1069 atgtgcatgcccagctagctctgtcagtagaacaagagactcctaagtttagagaagagg 1010
Query: 72 tttaaaaccattgactggtcattgttgctctgtcctctaagacagtctaagttgtcataa 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 tttaaaaccattgactggtcattgttgctctgtcctctaagacagtctaagttgtcataa 950
Query: 132 ctgtgtaaaatctccctgagagaccagatcttcctctggctggcactagatttctggggg 191
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 949 ctgtgtaaaatctccctgagagaccagatctttctctgactggcactagatttctggggg 890
Query: 192 aaaatatcaaccccctaggaacctttgtttcaacattctgatagccaagaaagggcagaa 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 aaaatatcaaccccctaggaacctttgtttcaacattctgatagccaagaaagggcagaa 830
Query: 252 gtgtctttctctttagaatatctttgttcctgcctgaatcattacagcacacacacatac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gtgtctttctctttagaatatctttgttcctgcctgaatcattacagcacacacacatac 770
Query: 312 actcaca-tgcaca--cacacacacacacacaccagtctgccttcatctgactctcactg 368
|| |||| | |||| ||||||||||||| ||||||||||||||| |||||||||||| |
Sbjct: 769 acacacact-cacacgcacacacacacacccaccagtctgccttcgtctgactctcacag 711
Query: 369 gaagtagagcccaagtactgcagaagactaaggtcagagctcaaatacacaaggctacac 428
|| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 710 gaggtagagcccaaatactgcagaagacaaaggtcagagctcaaatacacaaggctacac 651
Query: 429 ccagtcctcagtttccacaccacaacttccattcaatggagctagctacatgttcccaac 488
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 650 ccagtcctcagtttccacaccacaacttccattcagtggagctagctacatgttcccaac 591
Query: 489 agacaagaccttagtatgtctgggtttattgttgaggtcactcagcatcgtaagtcttgg 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 agacaagaccttagtatgtctgggtttattgttgaggtcactcagcatcgtaagtcttgg 531
Query: 549 gatccccttcatagaggcagacattgaggcttagagaggttaaaaaacttgcccaaggat 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gatccccttcatagaggcagacattgaggcttagagaggttaaaaaacttgcccaaggat 471
Query: 609 gcacagctaacaagggatggaagaacccgaccagagcaggtcagcggaagaagtctattc 668
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 470 gcacagctaacaagggatggaagaacccgaccagagcaggccagcggaagaagcctattc 411
Query: 669 a 669
|
Sbjct: 410 a 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_l16.g1 MSMg01no307_l16.g1 CHROMAT_FILE:
MSMg01no307_l16.g1 PHD_FILE: MSMg01no307_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:51 2005
(245 letters)
>mm_chr14_33335720_33336363
Length = 644
Score = 453 bits (234), Expect = e-132
Identities = 242/245 (98%), Gaps = 1/245 (0%)
Strand = Plus / Plus
Query: 1 tcatcattattcacagctatatgatagcttatgtagaagatacagaagaattcgctgtgg 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 201 tcatcattattcacagctatatgatagcttttgtagaagatacagaagaatt-gctgtgg 259
Query: 61 aatgaccacaagacttttaataatagcattgaatacatagtgcataaaaattagttattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatgaccacaagacttttaataatagcattgaatacatagtgcataaaaattagttattc 319
Query: 121 ttgtatgctaggaagaataaaagataaaatttaatataagtatcagttttaatccaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttgtatgctaggaagaataaaagataaaatttaatataagtatcagttttaatccaaaga 379
Query: 181 cctagaaataaatcttaggaaaaaaagcagttctgaaatgttttatatatctaanaactg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 380 cctagaaataaatcttaggaaaaaaagcagttctgaaatgttttatatatctaaaaactg 439
Query: 241 caaaa 245
|||||
Sbjct: 440 caaaa 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 644
Length adjustment: 9
Effective length of query: 236
Effective length of database: 635
Effective search space: 149860
Effective search space used: 149860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
