Query= MSMg01no307_p24.b1 MSMg01no307_p24.b1 CHROMAT_FILE:
MSMg01no307_p24.b1 PHD_FILE: MSMg01no307_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:12 2005
(691 letters)
>mm_chr14_24298542_24299632
Length = 1091
Score = 1294 bits (669), Expect = 0.0
Identities = 681/687 (99%), Gaps = 4/687 (0%)
Strand = Plus / Plus
Query: 5 gaattcatccatgctttgccattggctatagacatcaaaacttgacaagcttcttctgga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatccatgctttgccattggctatagacatcaaaacttgacaagcttcttctgga 264
Query: 65 caagtgtcaacaagatagttcctggtagaaccctgtgagatggctattttaactgcaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caagtgtcaacaagatagttcctggtagaaccctgtgagatggctattttaactgcaaac 324
Query: 125 ccatttggatgagtacgagaaatgttgagacatcagtaaaaaggtgttgaggtcaattta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccatttggatgagtacgagaaatgttgagacatcagtaaaaaggtgttgaggtcaattta 384
Query: 185 agtatccatacagcatcttgaaaaatgacactccataaaatctttcaactggggaattgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtatccatacagcatcttgaaaaatgacactccataaaatctttcaactggggaattgt 444
Query: 245 ttgtttgtttgtttgtttgtttgtagtttttaccattaactaccacatatatttcatgac 304
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgtttgtttgtttgtttgt----agtttttaccattaactaccacatatatttcatgac 500
Query: 305 aacatgagcaatgcaatccccttggttggtgtttcaagttcacagagatactgttgtcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacatgagcaatgcaatccccttggttggtgtttcaagttcacagagatactgttgtcct 560
Query: 365 atcatgaggactgaagtctgtatacactaggagataggaagtggatggaattaattgctt 424
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 atcatgaggactgaagtctgtatacaataggagataggaagtggatggaattaattgctt 620
Query: 425 gagttagaaatactactttttatttttttccatatccttatagacaggttggttttacct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagttagaaatactactttttatttttttccatatccttatagacaggttggttttacct 680
Query: 485 ctttgagaaggaccatgcctctgtgcccactgaatctgctaaataagagggaggtcttag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctttgagaaggaccatgcctctgtgcccactgaatctgctaaataagagggaggtcttag 740
Query: 545 tagtcactctgcatgctgccccccccccatcactgtaaccaaatacccaatagaaacaaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tagtcactctgcatgctgccccccccccatcactgtaaccaaatacccaatagaaacaaa 800
Query: 605 ctaagagaggtttggcttatggtttctggggttcaacccttatttgcttggttctgtgtg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctaagagaggtttggcttatggtttctggggttcaacccttatttgcttggttctgtgtg 860
Query: 665 cacagataggactcaatagtggaagaa 691
||||||||||||||||||||||||||
Sbjct: 861 tacagataggactcaatagtggaagaa 887
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_p24.g1 MSMg01no307_p24.g1 CHROMAT_FILE:
MSMg01no307_p24.g1 PHD_FILE: MSMg01no307_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:12 2005
(669 letters)
>mm_chr14_24336693_24337761
Length = 1069
Score = 1019 bits (527), Expect = 0.0
Identities = 545/551 (98%)
Strand = Plus / Minus
Query: 1 actagttatccagcataaccaaacctgtgagctccaggctgagtgatagatctcatttca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 551 actagttatccagcataaccaaacctgtgagctccaggctgagtgagagatctcatttca 492
Query: 61 gaaaataatgtagagagtaattgaggaagatgcctgatgccagcctctggcttccatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gaaaataatgtagagagtaattgaggaagatgcctgatgccagcctctggcttccatgtg 432
Query: 121 cacatgtgcccacctgtgcatgtccagaaacaaattcccctctctgaaaggaaataaagg 180
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 431 cacatgtgaccacctgtgcatgtccagatacaaattcccctctctgaaaggaaataaagg 372
Query: 181 agaaaagagttagcaaggtggcagtgatgtgataatacctgaacactggaatgggtgggt 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 371 agaaaagagttagcaaggtggcagtgatgtgataaaacctgaacactggaatgggtgggt 312
Query: 241 tggggagcaggacagggggaggatatagggggctttggggatagcatttgaaatgtaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tggggagcaggacagggggaggatatagggggctttggggatagcatttgaaatgtaaat 252
Query: 301 gaagaaaatatctaataaaaatataaataaagaaaatatccaattaaaaaaaaaactaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gaagaaaatatctaataaaaatataaataaagaaaatatccaattaaaaaaaaaactaat 192
Query: 361 gagaaactgaagcaaaggtcaaccaatctactcttagagatctatggttgtaagcaacag 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 191 gagaaactgaagcaaaggtcaaccaatctacccttagagatctatggttgtaagcaacag 132
Query: 421 agatggatttttgctgactaagcaatttttaaagacccactaaagtaacttataaaatcc 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 131 agatggatttttgctgactaagcaattttttaagacccactaaagtaacttataaaatcc 72
Query: 481 aggagaaatctgaagagcaaggtcccagaaaggacagaaaacagccagaaatgaggcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 aggagaaatctgaagagcaaggtcccagaaaggacagaaaacagccagaaatgaggcttt 12
Query: 541 gccatccagga 551
|||||||||||
Sbjct: 11 gccatccagga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
