Query= MSMg01no311_d14.b1 MSMg01no311_d14.b1 CHROMAT_FILE:
MSMg01no311_d14.b1 PHD_FILE: MSMg01no311_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:01 2005
(316 letters)
>mm_chr14_76257516_76258231
Length = 716
Score = 493 bits (255), Expect = e-144
Identities = 300/323 (92%), Gaps = 13/323 (4%)
Strand = Plus / Plus
Query: 5 gaattcatccagattcttctctgtcctgctgatgaa-------------ggtctgggaag 51
|||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 192 gaattcatccagattcttctctgtcctgctgatgaagagcttcccttctggtctggggag 251
Query: 52 ctgcaggggcgtcctgtcaaatagaggtcctgtgatctgggtgaggagaaaataaaggtg 111
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 252 ctgcaggggcgtcctgtcaaatagaggtcctgtgatctgggtgaggagaaaatgaaggtg 311
Query: 112 gccttgctgcctcccattttcctaaaggccaaagtggcatcttctagggtattgagacct 171
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 312 gccttgctgcctcccattttcctaaatgccaaagtggcatcttctagggtaatgagacct 371
Query: 172 tgaaccccatcattaatatcctaagagcattgcgggggccaatgctctgagacacgtgaa 231
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 372 tgaaccccatcattaatatcctaagagcatcgcgggggccagtgctctgagacacgtgaa 431
Query: 232 ctgtacaaaacacctggcaaatattgcttgacttcccccatcattttttttgataatttt 291
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 432 ctgtacaaaacacctggcaaatattgcttgacttcccccatcaagtcctttgataatttt 491
Query: 292 gttgaatattcatcctttctaat 314
|||||||||||||||||||||||
Sbjct: 492 gttgaatattcatcctttctaat 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_d14.g1 MSMg01no311_d14.g1 CHROMAT_FILE:
MSMg01no311_d14.g1 PHD_FILE: MSMg01no311_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:01 2005
(286 letters)
>mm_chr14_76407503_76408188
Length = 686
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Minus
Query: 1 attgtgatcacattgttattccaagattactacgagaactaatgctgacaactgacagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 attgtgatcacattgttattccaagattactacgagaactaatgctgacaactgacagtc 426
Query: 61 agtgaatacttattctccacaacacatatgcttcgtgttttattaaagtctcttctttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 agtgaatacttattctccacaacacatatgcttcgtgttttattaaagtctcttctttgc 366
Query: 121 ttctcataacaggatagctgaaaggtctaaactacttatgtgaagaacagaggcagatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttctcataacaggatagctgaaaggtctaaactacttatgtgaagaacagaggcagatta 306
Query: 181 tttattagagaattaatatatttttccatcttagaatttaacctccagttacttctgttt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 305 tttattagagaattaatatatttttccatcttagaatttaacctccggttacttctgttt 246
Query: 241 ttctgtttctttttttagacatagtatttttatggttaagaacaa 285
|||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 245 ttctgtttctggttttagacatagtatttttatggttaagaacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
