CTATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTTATATATGTATTTATATATGTATATATGTGTATATATGTCTA
GTCATTGTATATGTGTGTGTGTATCCTATATATTTTCCATAAATTCATAT
ATATAAACTCAGTATACTGTGGTAGATAATAAAAGCAAAACTATGTCAGT
TTACTGATTATCTTCAAGAGTCTATCATAGCTGATCTATTCTTTGATATT
ACAAGTTAAAGGTAAGATCCCATCAGGATCACAAGTTAAAGATAGATAAT
ATTGTTTCCCACATTGAAAAGTTACTACTGGGGAAAGCGGCTTAGTCCTC
TTAGCAACCCTTGAAATAGACATCATATACCACTCAAACAGTAGATAGGA
TTGGAGCAGAGCTGCCAGAACTGAAGTGTTCTAACTTATGAGTGAGGCAT
TGTGATCATACATACAGCTAGTTATTGGAAACATTGCAGAAGAGGACCTC
AAATTTCATAAACAAGTCATTTAACACTGACTTTTTCTCTTCTGAGGTAT
CTCTGGCTTTTGAGACTCTGGTCTATAAACTCCTCTATTTACCACCCTCT
CAAACCTATCTTTGATGTTTGATCTTCATAATTAATATATTTATGCTTAT
GCCACCATAATGTATCAAGCAGCCTCTTGNTGNNGTCAAGTTTGTGAGCC
ATTTTCATGTGTAAATATCCTTGTCTTTGAGG

TCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGTTAGTAGGATTCTTACGTTTGCC
TTTTGCAATCTGGTAATCTCTGAAGCTAGCTGTTATAGTTGTCACTGTTA
AGAGCTTGCTCTTCAGGTGACTCTGTTAGCCTCTATAAGCAGACCTGGGA
GGGTAGCTCTCTCCTTAGTTTCAGTGGGCAGTGTATTCTCTGCAGGCAAG
CTCTCTTCTTGCAGGGAAGGTACCCAGATTTCTGGTGTTCGAACCAGACT
CCTGGCAGAAGTTGTGTTCCACTCACTAGTGGTCTTAGGATCCCGTGTGG
AATCCTGTGTGGTTTTTTGTTGGCGCCACGCGACTCTGCTGGCAAGGTAC
CCTGGGGCTCGAGTGGACCGCAAGGGGATTAAAACAAAAGTCAGGGCGGG
GGGGGCTGCTTCCCTATTTCCCACGGTCTCAGGTTCCGGGCGATTGGATT
GGGGCAGGTGCTGTGTTCCACTCACCAGAGGTCTTAGGATCCCGTGGGGA
ATCCTGTGTGGGCCCGTGCGGGTGTCGGNCGAGTCCGCTGGCAAGGTACC
CTGGGGCTTGAGTCACTGTGTTGCATTTCGAGAGATGCTTTATAGCTTAA
TTTATGATTTGCTTTATAGAAAATTCCTTTAGTTGCTAAGGATATGCATT
TTTCAGTTGCTAGATATAATATTCTTGCTAACTCCACTG

Query= MSMg01no311_o02.b1 MSMg01no311_o02.b1 CHROMAT_FILE:
MSMg01no311_o02.b1 PHD_FILE: MSMg01no311_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:50 2005
         (684 letters)



>mm_chr14_9649475_9650558
          Length = 1084

 Score = 1050 bits (543), Expect = 0.0
 Identities = 623/658 (94%), Gaps = 17/658 (2%)
 Strand = Plus / Minus

                                                                       
Query: 24  tttatatatgtatatatgtgtatatatgtctagtcattgtatatgtgtgtgtgtatccta 83
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 998 tttatatatgtatatatgtgtatatatgtctagtcattgtata--tgtgtgtgtatccta 941

                                                                       
Query: 84  tatattttccataaatt--catatatataaactcagtatactgtggtagataataaaagc 141
           |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 tatattttccataaatttatatatatataaactcagtatactgtggtagataataaaagc 881

                                                                       
Query: 142 aaaactatgtcagtttactgattatcttcaagagtctatcatagctgatctattctttga 201
                 ||     |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 ------at-----tttacttattatcttcaagagtctatcatagctgatctattctttga 832

                                                                       
Query: 202 tattacaagttaaaggtaagatcccatcaggatcacaagttaaagatagataatattgtt 261
           ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 831 tattacaagttaaaggtaagatcccatcaagatcacaagttagagatagataatattgtt 772

                                                                       
Query: 262 tcccacattgaaaagttactactggggaaagcggcttagtcctcttagcaacccttgaaa 321
           |||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||  
Sbjct: 771 tcccacattggaaagatactactggggaaagtggcttagtcctcttagcaacccttgagg 712

                                                                       
Query: 322 tagacatcatataccactcaaacagtagataggattggagcagagctgccagaactgaag 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tagacatcatataccactcaaacagtagataggattggagcagagctgccagaactgaag 652

                                                                       
Query: 382 tgttctaacttatgagtgaggcattgtgatcatacatacagctagttattggaaacattg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tgttctaacttatgagtgaggcattgtgatcatacatacagctagttattggaaacattg 592

                                                                       
Query: 442 cagaagaggacctcaaatttcataaacaagtcatttaacactgactttttctcttctg-a 500
           |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||| |
Sbjct: 591 cagaagagaacctcaaatttcatcaacaagtcatttaacactgacttcttctcttctgca 532

                                                                       
Query: 501 ggtatctctggcttttgagactctggtctataaactcctctatttaccaccctctcaaac 560
            |||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 531 -gtatctctggtttttgaaactctggtctataaactcctctatttaccaccttctcaaac 473

                                                                       
Query: 561 ctatctttgatgtttgatcttcataattaatatatttatgcttatgccaccataatgtat 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ctatctttgatgtttgatcttcataattaatatatttatgcttatgccaccataatgtat 413

                                                                     
Query: 621 caagcagcctcttgntgnngtcaagtttgtgagccattttcatgtgtaaatatccttg 678
           |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 412 caagcagcctcttggtggggtcaagtttgtgagccattttcatgtgtaaatatccttg 355


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space:   723876
Effective search space used:   723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)