Query= MSMg01no312_a24.b1 MSMg01no312_a24.b1 CHROMAT_FILE:
MSMg01no312_a24.b1 PHD_FILE: MSMg01no312_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:03 2005
(246 letters)
>mm_chr14_109308250_109308895
Length = 646
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Minus
Query: 1 taaaactaattagtggccacccaccctccgccccagcaactacatactgaaaattgttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taaaactaattagtggccacccaccctccgccccagcaactacatactgaaaattgttga 386
Query: 61 agtactcatctttatggaaatcaatcattatcctaaaaaaagtgtttcactcttatcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtactcatctttatggaaatcaatcattatcctaaaaaaagtgtttcactcttatcata 326
Query: 121 ccaatttctggttatggcccagtaattaccaagggaaagcagtgaactatttgaatttta 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccaatttctggttaaggcccagtaattaccaagggaaagcagtgaactatttgaatttta 266
Query: 181 ctgaccaatgtaattctggtctgaatcagatgccctagggaattctaagcaactctattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgaccaatgtaattctggtctgaatcagatgccctagggaattctaagcaactctattt 206
Query: 241 catca 245
|||||
Sbjct: 205 catca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no312_a24.g1 MSMg01no312_a24.g1 CHROMAT_FILE:
MSMg01no312_a24.g1 PHD_FILE: MSMg01no312_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:03 2005
(293 letters)
>mm_chr14_109193927_109194616
Length = 690
Score = 522 bits (270), Expect = e-153
Identities = 284/290 (97%), Gaps = 3/290 (1%)
Strand = Plus / Plus
Query: 1 atcagagaacattgatgagataagttctaaacaatggaaagtttagaaaactattcacct 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcagagaacaatgatgagataagttctaaacaatggaaagtttagaaaactattcacct 260
Query: 61 cagtaaaagtattgatttggttgtttaaggaagggaaagaaatgtagtaccgtggaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtaaaagtattgatttggttgtttaaggaagggaaagaaatgtagtaccgtggaattt 320
Query: 121 attattgaagctactatctatactactacaatgatacttacctaaaaatggggtaaattg 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 attattgaagctactatctatactac---aatgatacttacctaaaaatggggtaaattg 377
Query: 181 ctaaacaaagaattctcaactaaggaatactgaatggctgagaaccaccttaagaaatgt 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctaaacaaagaattctcaactagggaatactgaatggctgagaaccaccttaagaaatgt 437
Query: 241 tcaacatccttggtcatcagggaaatgcaaatcaaataaactctgacatt 290
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 438 tcaacatccttggtcatcagggaaatgcaaatcaaataaactccgacatt 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 690
Length adjustment: 9
Effective length of query: 284
Effective length of database: 681
Effective search space: 193404
Effective search space used: 193404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
