Query= MSMg01no313_d19.b1 MSMg01no313_d19.b1 CHROMAT_FILE:
MSMg01no313_d19.b1 PHD_FILE: MSMg01no313_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:42 2005
(438 letters)
>mm_chr14_68351622_68352459
Length = 838
Score = 808 bits (418), Expect = 0.0
Identities = 433/442 (97%), Gaps = 8/442 (1%)
Strand = Plus / Plus
Query: 1 tgagaacaccacaatatttatcttaaaa----ccccttaattaagatgattggattttag 56
|||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 tgagaacaccacaatatttatctt----ttttccccttaattaagatgattggattttag 256
Query: 57 aattaataaaataatagctatgcaattgatcatggctattagcaggtatgtgactaactg 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aattaataaaataatagctatgcaattgatcatggctattagcaggtatgtgactaactg 316
Query: 117 tgatccctctttaagcagttcacctgtcagtgtagtgtagccatctctgtcttactatat 176
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 317 tgatccctctttaagcagttcacctgttagtgtagtgtagccatctctgtcttactatat 376
Query: 177 agaggtgggatttcttttatgagaacccatgaaagccacggacgccgtgtactcccagtt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agaggtgggatttcttttatgagaacccatgaaagccacggacgccgtgtactcccagtt 436
Query: 237 ccctttgctcaagctgataataaactccacggatggaaaggccaatggcttctgataatc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ccctttgctcaagctgataataaactccacggatggaaaggccaatggcttctgataatc 496
Query: 297 tcggtgcttagttacagtgattaaactcaattcagacagatggtttcagcatcatgacag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcggtgcttagttacagtgattaaactcaattcagacagatggtttcagcatcatgacag 556
Query: 357 tctgtgctttttaattccagggtttaaacttcagtggtgctgatctttcccgtttggacc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tctgtgctttttaattccagggtttaaacttcagtggtgctgatctttcccgtttggacc 616
Query: 417 ttcgatacattaacttcaaaat 438
||||||||||||||||||||||
Sbjct: 617 ttcgatacattaacttcaaaat 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_d19.g1 MSMg01no313_d19.g1 CHROMAT_FILE:
MSMg01no313_d19.g1 PHD_FILE: MSMg01no313_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:42 2005
(210 letters)
>mm_chr14_68516992_68517601
Length = 610
Score = 391 bits (202), Expect = e-113
Identities = 208/210 (99%)
Strand = Plus / Minus
Query: 1 attgtggcctagccaatgacaaaattgaaaagatgtaaaataaagtttaaaagggggcta 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 attgtggcccagccaatgacaaaattgaaaagatgtaaaataaagtttaaaagggggcta 351
Query: 61 gtagagaccaagcaccattcctcgttcctgaaaatagctaagtgtgtaggttgcagtttg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gcagagaccaagcaccattcctcgttcctgaaaatagctaagtgtgtaggttgcagtttg 291
Query: 121 ctcttttaggtatttggaaagggctcagacgctagcacagtgttccgaaacttgtctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ctcttttaggtatttggaaagggctcagacgctagcacagtgttccgaaacttgtctccc 231
Query: 181 ctccactcctaatccatttaacagtgaatc 210
||||||||||||||||||||||||||||||
Sbjct: 230 ctccactcctaatccatttaacagtgaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
